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The map label for this gene is ygjK

Identifier: 30064423

GI number: 30064423

Start: 3207989

End: 3210340

Strand: Direct

Name: ygjK

Synonym: S3327

Alternate gene names: 30064423

Gene position: 3207989-3210340 (Clockwise)

Preceding gene: 30064422

Following gene: 30064424

Centisome position: 69.75

GC content: 54.42

Gene sequence:

>2352_bases
ATGAAAATCAAAACTATTTTAACGCCAGTAACCTGCGCTCTGCTGATAAGTTTTTCCGCTCATGCCGCTAACGCCGACAA
TTATAAAAACGTGATTAACCGTACTGGTGCGCCGCAGTACATGAAGGATTACGATTACGACGATCACCAGCGTTTTAATC
CGTTTTTCGATCTCGGAGCCTGGCATGGTCATCTGTTGCCAGACGGCCCGAACACCATGGGCGGCTTTCCGGGCGTTGCG
CTGCTGACGGAAGAATACATCAACTTTATGGCCAGCAATTTCGACCGCCTGACTGTCTGGCAAGACGGCAAGAAAGTCAA
CTTCACGCTGGAGGCATACAGTATTCCCGGCGCGCTGGTGCAAAAACTGACAGCAAAAGATGTGCAGGTCGAAATGACTC
TGCGCTTCGCCACGCCGCGCACGTCACTACTGGAAACTAAAATCATCAGCAATAAACCGCTGGATCTGGTGTGGGATGGC
GAACTGCTGGAAAAACTGGAAGCGAAAGAAGGGAAACCGCTTTCCGATAAAACCATTGCTGGCGAATACCCTGACTATCA
GCGCAAAATCAGCGCCACCCGTGATGGCCTGAAAGTCACCTTTGGCAAAGTGCGCGCCACCTGGGATCTGCTGACCTCCG
GCGAATCGGAATATCAGGTGCATAAATCCCTGCCGGTGCAGACTGAAATCAACGGTAATCGCTTTACCAGTAAGGCGCAT
ATCAACGGTTCGACCACGCTCTACACCACCTATTCCCATCTGCTGACCGCTCAGGAAGTTAGCAAAGAGCAAATGCAGAT
CCGCGATATTCTGGCGCGTCCGGCGTTTTATCTCACCGCCTCGCAGCAACGCTGGGAAGAATACCTGAAGAAAGGGTTAA
CCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCG
GGCGGTGCGGTGAATTATAACACCGTCACGCCGTCGGTGACCGGACGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGA
TACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGATATCGCCAAAGAGAATATCCGCGCGGTCTTCTCCTGGC
AGATCCAGCCTGGCGACAGCGTGCGTCCGCAGGATGTGGGCTTTGTCCCCGACCTGATAGCGTGGAACCTTAGCCCCGAG
CGTGGTGGCGATGGCGGCAACTGGAACGAACGTAATACCAAACCCAGCCTTGCCGCCTGGTCGGTGATGGAAGTATACAA
CGTCACCCAGGATAAAGCCTGGTTGGCAGAGATGTACCCGAAACTGGTGGCCTATCACGACTGGTGGTTACGTAACCGCG
ATCATAACGGCAACGGGGTGCCGGAATATGGCGCGACCCGCGACAAAGCCCACAACACCGAGAGCGGCGAGATGCTGTTT
ACGGTGAAAAAAGGCGATAAAGAAGAGACGCAGTCTGGGCTGAACAACTACGCCCGCGTGGTGGAGAAAGGCCAGTACGA
CAGTCTGGAAATTCCGGCACAGGTCGCTGCGTCGTGGGAATCGGGGCGTGATGATGCCGCCGTCTTTGGTTTTATCGACA
AAGAACAGTTGGATAAATATGTCGCTAATGGCGGCAAACGTAGCGACTGGACGGTGAAATTCGCCGAAAACCGCAGTCAG
GACGGAACGTTGCTGGGCTACTCGCTATTGCAGGAGTCGGTGGATCAGGCCAGCTATATGTACAGCGATAACCATTATCT
GGCGGAGATGGCAACCATCCTCGGTAAGCCAGAAGAGGCCAAACGCTATCGCCAGTTGGCACAGCAGCTCGCGGACTACA
TCAACACCTGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGAAGATAAACCACTGGCGAACGGCTGC
GCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAA
TGCCGACCCGGTGGTGAAGGTGATGCTCGATCCTAAAGAGTTCAACACATTTGTTCCGCTGGGAACGGCGGCGTTAACCA
ATCCGGCTTTTGGCGCTGATATCTACTGGCGCGGGCGCGTATGGGTGGATCAGTTCTGGTTTGGTCTGAAAGGGATGGAG
CGTTACGGTTATCGTGATGATGCCCTGAAGCTGGCGGATACGTTCTTCAGGCACGCCAAAGGATTAACCGCCGATGGCCC
AATTCAGGAGAATTACAACCCGCTGACAGGCGCGCAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCTCATTTGTATA
TGTTGTATAACGATTTTTTCCGTAAGCAGTAA

Upstream 100 bases:

>100_bases
GCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTAACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTG
GTAATAAGGACTGTAATCTC

Downstream 100 bases:

>100_bases
TTTGCAACGGCTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGCAATCCCCCAAGCCGGATAAAACACGGCA
AGCGTCGCATCCGGCGTTAC

Product: putative glycosyl hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 783; Mature: 783

Protein sequence:

>783_residues
MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA
LLTEEYINFMASNFDRLTVWQDGKKVNFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKIISNKPLDLVWDG
ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP
GGAVNYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE
RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKAWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
TVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQ
DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGC
AGKPIVERGKGPEGWSPLFNGAATQANADPVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ

Sequences:

>Translated_783_residues
MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA
LLTEEYINFMASNFDRLTVWQDGKKVNFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKIISNKPLDLVWDG
ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP
GGAVNYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE
RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKAWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
TVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQ
DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGC
AGKPIVERGKGPEGWSPLFNGAATQANADPVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ
>Mature_783_residues
MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA
LLTEEYINFMASNFDRLTVWQDGKKVNFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKIISNKPLDLVWDG
ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP
GGAVNYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE
RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKAWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
TVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQ
DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGC
AGKPIVERGKGPEGWSPLFNGAATQANADPVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789462, Length=783, Percent_Identity=99.1060025542784, Blast_Score=1617, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR001661 [H]

Pfam domain/function: PF01204 Trehalase [H]

EC number: NA

Molecular weight: Translated: 88345; Mature: 88345

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGA
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHCCCC
WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVNFTLEAYSIPGALV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCHHHH
QKLTAKDVQVEMTLRFATPRTSLLETKIISNKPLDLVWDGELLEKLEAKEGKPLSDKTIA
HHHHHCCEEEEEEEEECCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCCCCCCC
GEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
CCCCCHHHHHHHCCCCCEEEEHHHHEEEHHHHCCCCCEEHHHCCCEEEECCCCEEEEEEE
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATP
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCH
EQTRVAVKAIETLNGNWRSPGGAVNYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNP
HHHHHHHHHHHHCCCCCCCCCCEEEECEECCCCCCEEECCCCCCCCHHHHHHHHHHHCCH
DIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW
HHHHHCEEEEEEEEECCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHH
SVMEVYNVTQDKAWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
TVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY
EEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHH
VANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEA
HHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCHHH
KRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCHHHC
GAATQANADPVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
CCCCCCCCCCEEEEEECHHHCCCCCCCCHHHHCCCCCCCCEEECCEEEHHHHHHHHHHHH
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFF
HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RKQ
HCC
>Mature Secondary Structure
MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGA
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHCCCC
WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVNFTLEAYSIPGALV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCHHHH
QKLTAKDVQVEMTLRFATPRTSLLETKIISNKPLDLVWDGELLEKLEAKEGKPLSDKTIA
HHHHHCCEEEEEEEEECCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCCCCCCC
GEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
CCCCCHHHHHHHCCCCCEEEEHHHHEEEHHHHCCCCCEEHHHCCCEEEECCCCEEEEEEE
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATP
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCH
EQTRVAVKAIETLNGNWRSPGGAVNYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNP
HHHHHHHHHHHHCCCCCCCCCCEEEECEECCCCCCEEECCCCCCCCHHHHHHHHHHHCCH
DIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW
HHHHHCEEEEEEEEECCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHH
SVMEVYNVTQDKAWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
TVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY
EEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHH
VANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEA
HHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCHHH
KRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCHHHC
GAATQANADPVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
CCCCCCCCCCEEEEEECHHHCCCCCCCCHHHHCCCCCCCCEEECCEEEHHHHHHHHHHHH
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFF
HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RKQ
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]