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The map label for this gene is ebgC

Identifier: 30064421

GI number: 30064421

Start: 3204822

End: 3205271

Strand: Direct

Name: ebgC

Synonym: S3324

Alternate gene names: 30064421

Gene position: 3204822-3205271 (Clockwise)

Preceding gene: 30064420

Following gene: 30064422

Centisome position: 69.68

GC content: 44.89

Gene sequence:

>450_bases
ATGAGGATCATCGATAACTTAGAACAGTTCCGCCAGATTTACGCCTCTGGCAAGAAGTGGCAACGCTGCGTTGAAGCGAT
TGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGATTCATTGACCTACCGTGTGGAAAATGACTCCG
CGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATAT
GCGCCGAAAGAGACATTACAGGTAGTGGAATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAAC
CGTAGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCCATGAAGCGTATCGGTTTATCTGCAATAACGCGGTCAAAA
AAGTGGTTCTCAAAGTCACCATCGAAGATGGTTATTTCCATAACAAATAA

Upstream 100 bases:

>100_bases
TGCTGCCGGTTTCTGGCGGAGAAGCTACCGCGCAAAGCCTGGCGTCGTATGAGTTCGGCGCAGGGTTCTTTTCCACGAAT
TTGCACAGCGAGAATAAGCA

Downstream 100 bases:

>100_bases
CAACTACGGCGGCAAAAGGAGTTTGCCGCCACCGCTACCCTACACATTTTCGGAGATGTGTTATGTCTGATACCAAACGT
AATACAATCGGCAAATTCGG

Product: cryptic beta-D-galactosidase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVENDSATDALFTGHRRYFEVHYYLQGQQKIEY
APKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK

Sequences:

>Translated_149_residues
MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVENDSATDALFTGHRRYFEVHYYLQGQQKIEY
APKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK
>Mature_149_residues
MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVENDSATDALFTGHRRYFEVHYYLQGQQKIEY
APKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK

Specific function: Required for full activity of the ebgA enzyme. Exact function not known [H]

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789458, Length=149, Percent_Identity=99.3288590604027, Blast_Score=307, Evalue=2e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004375 [H]

Pfam domain/function: PF04074 DUF386 [H]

EC number: 3.2.1.23

Molecular weight: Translated: 17470; Mature: 17470

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVENDSATDALFT
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCCCHHHHH
GHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDI
CCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCEEEEEEH
HEAYRFICNNAVKKVVLKVTIEDGYFHNK
HHHHHHHHHHHHHHEEEEEEECCCCCCCC
>Mature Secondary Structure
MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVENDSATDALFT
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCCCHHHHH
GHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDI
CCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCEEEEEEH
HEAYRFICNNAVKKVVLKVTIEDGYFHNK
HHHHHHHHHHHHHHEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]