| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is glcG
Identifier: 30064327
GI number: 30064327
Start: 3100499
End: 3100903
Strand: Reverse
Name: glcG
Synonym: S3217
Alternate gene names: 30064327
Gene position: 3100903-3100499 (Counterclockwise)
Preceding gene: 30064334
Following gene: 30064326
Centisome position: 67.42
GC content: 54.81
Gene sequence:
>405_bases ATGAAAACTAAAGTCATTCTTAGCCAGCAAATGGCGAGTGCAATTATTGCCGCAGGTCAGGAAGAGGCGCAGAAAAATAA CTGGTCTGTTTCCATTGCTGTTGCCGATGACGGCGGTCATCTGCTGGCGTTAAGTCGCATGGACGATTGCGCGCCGATTG CGGCTTACATCTCCCAGGAGAAAGCGCGTACCGCCGCGCTGGGGCGTCGTGAAACTAAGGGCTATGAAGAGATGGTGAAC AACGGACGTACCGCGTTCGTGACTGCGCCGTTACTGACGTCGCTGGAAGGCGGCGTACCGGTTGTTGTTGATGGGCAAAT TATTGGTGCCGTGGGCGTTTCTGGTTTAACCGGAGCACAGGATGCGCAGGTCGCGAAAGTGGCAGCAGCGGTGTTGGCGA AATAA
Upstream 100 bases:
>100_bases GCCAACATTGGTTGCCAGACGCATCTGGCGAGCGCCGGTCGTACCTCTGTGCGTCACTGGATTGAAATTGTAGAACAAGC CCTTGAAAAGGAATAAAAAA
Downstream 100 bases:
>100_bases GCGAAAACGAGGAGAGAAACAATGAGTCAAACCATAACCCAGGGCCGTTTACGCATTGACGCCAATTTTAAACGTTTTGT GGATGGAGAAGTTTTGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKTKVILSQQMASAIIAAGQEEAQKNNWSVSIAVADDGGHLLALSRMDDCAPIAAYISQEKARTAALGRRETKGYEEMVN NGRTAFVTAPLLTSLEGGVPVVVDGQIIGAVGVSGLTGAQDAQVAKVAAAVLAK
Sequences:
>Translated_134_residues MKTKVILSQQMASAIIAAGQEEAQKNNWSVSIAVADDGGHLLALSRMDDCAPIAAYISQEKARTAALGRRETKGYEEMVN NGRTAFVTAPLLTSLEGGVPVVVDGQIIGAVGVSGLTGAQDAQVAKVAAAVLAK >Mature_134_residues MKTKVILSQQMASAIIAAGQEEAQKNNWSVSIAVADDGGHLLALSRMDDCAPIAAYISQEKARTAALGRRETKGYEEMVN NGRTAFVTAPLLTSLEGGVPVVVDGQIIGAVGVSGLTGAQDAQVAKVAAAVLAK
Specific function: Unknown
COG id: COG3193
COG function: function code R; Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glcG family [H]
Homologues:
Organism=Escherichia coli, GI1789349, Length=134, Percent_Identity=99.2537313432836, Blast_Score=266, Evalue=4e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005624 [H]
Pfam domain/function: PF03928 DUF336 [H]
EC number: NA
Molecular weight: Translated: 13765; Mature: 13765
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKVILSQQMASAIIAAGQEEAQKNNWSVSIAVADDGGHLLALSRMDDCAPIAAYISQE CCCHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHH KARTAALGRRETKGYEEMVNNGRTAFVTAPLLTSLEGGVPVVVDGQIIGAVGVSGLTGAQ HHHHHHHCCCCCCCHHHHHHCCCEEEEEHHHHHHCCCCCCEEECCEEEEEECCCCCCCCC DAQVAKVAAAVLAK CHHHHHHHHHHHCC >Mature Secondary Structure MKTKVILSQQMASAIIAAGQEEAQKNNWSVSIAVADDGGHLLALSRMDDCAPIAAYISQE CCCHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHH KARTAALGRRETKGYEEMVNNGRTAFVTAPLLTSLEGGVPVVVDGQIIGAVGVSGLTGAQ HHHHHHHCCCCCCCHHHHHHCCCEEEEEHHHHHHCCCCCCEEECCEEEEEECCCCCCCCC DAQVAKVAAAVLAK CHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]