| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yqeI [C]
Identifier: 30064322
GI number: 30064322
Start: 3093545
End: 3094150
Strand: Reverse
Name: yqeI [C]
Synonym: S3212
Alternate gene names: 30064322
Gene position: 3094150-3093545 (Counterclockwise)
Preceding gene: 30064323
Following gene: 30064321
Centisome position: 67.27
GC content: 41.58
Gene sequence:
>606_bases ATGAGCGATGACCGTTTTTATTTTTCTTTAGGGCAGGGAGTTAAGTTTTACCCAGCGTCTCGACGTATCACCACCAGTAC AGGCAATGTAATCAATCTGTCTGAAAACGGCTATCGATTTTTACTCCTTTTACTACAGGGAGAATCCGATAAGCAACATA TTATCAATGAGGTTTGGCGGGAGCAGAAAGGTTCGGTAAGCGACAGCAGTTATTATGGGCAGATTTACATGCTTAGAAAG GCATTAGACGTCGCAGGTTTGTCGAGTTCTCTAATTAAAACCATTCCGCGAAAAGGCGTCAGATATCTGGGAAAGGTCGA GAAACATGTCTGTGAGAATGAGCGTGACAGTGATGAAGACAGTAGTAGCTATACCAACGATAGCGAGGCCAGGGAAGTAA ACACTGATGCAAACATTCCTGAGAATGATAACAGCCAGGAATTCTCTACTGAAGAGCTGCTCCCAATAAAACATACTGAC AAAAATATTGAATGGTATAGAACGAAGCAGTGGAGTGTTTTTATTAGCGTTCTTACCGTGTTAGCAGTGTGCTGGCTGAC GACGCTTGTTTTTTTAGTCTTACTATTTCTTAATCAAGATAAATGA
Upstream 100 bases:
>100_bases CTAATTGCTTAACTTAATGTAAACAATATGATTTTGCATCTTACTTCATACAAAGTTGTAATGAGTAGTCATGTGAAGAA GAAAACAGGGGTCGGTACTT
Downstream 100 bases:
>100_bases TATTAAATGTAATTTTTTTTGAAGACTAAATAGCGGGAATAGATAATTATAGCCACATCCCAAAAATATGGGATACCGGT GACACGCAGATGAAGCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator CadC
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSDDRFYFSLGQGVKFYPASRRITTSTGNVINLSENGYRFLLLLLQGESDKQHIINEVWREQKGSVSDSSYYGQIYMLRK ALDVAGLSSSLIKTIPRKGVRYLGKVEKHVCENERDSDEDSSSYTNDSEAREVNTDANIPENDNSQEFSTEELLPIKHTD KNIEWYRTKQWSVFISVLTVLAVCWLTTLVFLVLLFLNQDK
Sequences:
>Translated_201_residues MSDDRFYFSLGQGVKFYPASRRITTSTGNVINLSENGYRFLLLLLQGESDKQHIINEVWREQKGSVSDSSYYGQIYMLRK ALDVAGLSSSLIKTIPRKGVRYLGKVEKHVCENERDSDEDSSSYTNDSEAREVNTDANIPENDNSQEFSTEELLPIKHTD KNIEWYRTKQWSVFISVLTVLAVCWLTTLVFLVLLFLNQDK >Mature_200_residues SDDRFYFSLGQGVKFYPASRRITTSTGNVINLSENGYRFLLLLLQGESDKQHIINEVWREQKGSVSDSSYYGQIYMLRKA LDVAGLSSSLIKTIPRKGVRYLGKVEKHVCENERDSDEDSSSYTNDSEAREVNTDANIPENDNSQEFSTEELLPIKHTDK NIEWYRTKQWSVFISVLTVLAVCWLTTLVFLVLLFLNQDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23108; Mature: 22977
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDRFYFSLGQGVKFYPASRRITTSTGNVINLSENGYRFLLLLLQGESDKQHIINEVWR CCCCEEEEECCCCEEEECCCCEEEECCCCEEEECCCCEEEEEEEEECCCCHHHHHHHHHH EQKGSVSDSSYYGQIYMLRKALDVAGLSSSLIKTIPRKGVRYLGKVEKHVCENERDSDED HHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SSSYTNDSEAREVNTDANIPENDNSQEFSTEELLPIKHTDKNIEWYRTKQWSVFISVLTV CCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCHHHHHHHHHHH LAVCWLTTLVFLVLLFLNQDK HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDDRFYFSLGQGVKFYPASRRITTSTGNVINLSENGYRFLLLLLQGESDKQHIINEVWR CCCEEEEECCCCEEEECCCCEEEECCCCEEEECCCCEEEEEEEEECCCCHHHHHHHHHH EQKGSVSDSSYYGQIYMLRKALDVAGLSSSLIKTIPRKGVRYLGKVEKHVCENERDSDED HHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SSSYTNDSEAREVNTDANIPENDNSQEFSTEELLPIKHTDKNIEWYRTKQWSVFISVLTV CCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCHHHHHHHHHHH LAVCWLTTLVFLVLLFLNQDK HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA