| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yfjX [H]
Identifier: 30064312
GI number: 30064312
Start: 3086164
End: 3086637
Strand: Direct
Name: yfjX [H]
Synonym: S3200
Alternate gene names: 30064312
Gene position: 3086164-3086637 (Clockwise)
Preceding gene: 30064311
Following gene: 30064313
Centisome position: 67.1
GC content: 55.7
Gene sequence:
>474_bases ATGAAAACATTGTCTCAGAACACCACCTCTTCGGCCTGTGCACCGGAGACTGACCTGCAACAACTGGTTGCCACCCTCGT CCCTGATGAACAGCGCATCAGCTTCTGGCCGCAGCACTTTGGCCTCATTCCACAGTGGGTGACCCTGGAGCCCCGTGTCT TCGGCTGGATGGACCGTCTGTGCGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAACGGCGGGGCATTT ATGGCACCCGAACCGGATGACGATGATGACGAAACATGGGTACTGTTCAATGCCATGAACGGTAACCGCGCTGAAATGAG TCCGGAAGCTGCCGGCATTGCTGCCTGTCTGATGACGTACAGTCATCATGCCTGTCGTACGGAGTGTTATGCCATGACGG TCCATTATTACCGGCTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATCGACTGA
Upstream 100 bases:
>100_bases CCCTGATATTACCGGGTCATCACGGTCAGTGATGAACGTGATGTTGCCAGCTCCCGACCTTTACTCCCTCTCATTTATTC ACATTACAAGGATTTCATAC
Downstream 100 bases:
>100_bases ATGGTGGCAGGGACAATGCAGCAGCTTTCCTTTCTGCCCGGAGAAATGACAACCAGAGAGCGCAGCCTCATTCTGCGGGC CCTGAAAACCCTGGACCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKTLSQNTTSSACAPETDLQQLVATLVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGGAF MAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID
Sequences:
>Translated_157_residues MKTLSQNTTSSACAPETDLQQLVATLVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGGAF MAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID >Mature_157_residues MKTLSQNTTSSACAPETDLQQLVATLVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGGAF MAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the antirestriction protein family [H]
Homologues:
Organism=Escherichia coli, GI1788996, Length=137, Percent_Identity=75.1824817518248, Blast_Score=223, Evalue=3e-60, Organism=Escherichia coli, GI1786442, Length=157, Percent_Identity=66.8789808917197, Blast_Score=222, Evalue=8e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004914 - ProDom: PD012854 [H]
Pfam domain/function: PF03230 Antirestrict [H]
EC number: NA
Molecular weight: Translated: 17891; Mature: 17891
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLSQNTTSSACAPETDLQQLVATLVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRL CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHCCCCCEEEECCHHHHHHHHH CEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTY HHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH SHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID HCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure MKTLSQNTTSSACAPETDLQQLVATLVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRL CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHCCCCCEEEECCHHHHHHHHH CEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTY HHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH SHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID HCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]