| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30064299
Identifier: 30064299
GI number: 30064299
Start: 3069140
End: 3069739
Strand: Reverse
Name: 30064299
Synonym: S3187
Alternate gene names: NA
Gene position: 3069739-3069140 (Counterclockwise)
Preceding gene: 30064304
Following gene: 30064298
Centisome position: 66.74
GC content: 48.5
Gene sequence:
>600_bases ATGCAAACTTATAACACCAATCCCGCTTACGAAATGGCTCCCCAGCTCCTGGAGCACTTTAACCAGCATCTGGATTCATT ATTCGGGGTCTATTCGAAACTGTTACCGTTCAGAATGGATTTTGCTTACCGAAAAAACACCCTCAGCTACAGATGTGCCT GCAGGTACGCCATGTGCGCGGAGATGCTGCAACTGATTAACGAGGTGGGAGAGAAACTGGTCGGGTATGCCTGGGTGATG GAATATACAGAACGTAAAGGGCTTCACATTCATTTTGTGGGCTATCTGAACGGCCAGAGCCACAGGAGTTCGTATCTGGT ATCCAGATTGATGGGAGATATCTGGAGGCGGGTTACCGAGGGTAATGGTTACTACCACTGGTGCCGGTTTAATAAAAATT ATCCGGTAAACATTAACCACGTCATTCACTATTCAGATCACAAAGCGGTGAATGATTTACGCTATGCCATCAGCTACCTG GCCAAACGGGAACAGAAAGAATGTGGCATCATCCTGAAATGCAGCGGGCTTCCTGAAAAAAGTAACCGGGGTCGACCACG ACTGGACAGCCCCCTGCCGGGGATATGTGCTCTGGTGTAA
Upstream 100 bases:
>100_bases TCGTTACCGGAGGAAACACGTTCACCCTACTACCTGAGAACATCTTCTTCAAAAATTACGGCAACGCTTCTTCCTGTGTT ACAGAACACGAGGAAGAAAC
Downstream 100 bases:
>100_bases ACCCCTGAACGACAAGTACGGGCTGGCGCTAATCTTTGCTGTCGGTTCCGGCGGCCACTTCAGCGGCACTGCGCATTTTT TACGGCGTGGTCATTCCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MQTYNTNPAYEMAPQLLEHFNQHLDSLFGVYSKLLPFRMDFAYRKNTLSYRCACRYAMCAEMLQLINEVGEKLVGYAWVM EYTERKGLHIHFVGYLNGQSHRSSYLVSRLMGDIWRRVTEGNGYYHWCRFNKNYPVNINHVIHYSDHKAVNDLRYAISYL AKREQKECGIILKCSGLPEKSNRGRPRLDSPLPGICALV
Sequences:
>Translated_199_residues MQTYNTNPAYEMAPQLLEHFNQHLDSLFGVYSKLLPFRMDFAYRKNTLSYRCACRYAMCAEMLQLINEVGEKLVGYAWVM EYTERKGLHIHFVGYLNGQSHRSSYLVSRLMGDIWRRVTEGNGYYHWCRFNKNYPVNINHVIHYSDHKAVNDLRYAISYL AKREQKECGIILKCSGLPEKSNRGRPRLDSPLPGICALV >Mature_199_residues MQTYNTNPAYEMAPQLLEHFNQHLDSLFGVYSKLLPFRMDFAYRKNTLSYRCACRYAMCAEMLQLINEVGEKLVGYAWVM EYTERKGLHIHFVGYLNGQSHRSSYLVSRLMGDIWRRVTEGNGYYHWCRFNKNYPVNINHVIHYSDHKAVNDLRYAISYL AKREQKECGIILKCSGLPEKSNRGRPRLDSPLPGICALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23269; Mature: 23269
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTYNTNPAYEMAPQLLEHFNQHLDSLFGVYSKLLPFRMDFAYRKNTLSYRCACRYAMCA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH EMLQLINEVGEKLVGYAWVMEYTERKGLHIHFVGYLNGQSHRSSYLVSRLMGDIWRRVTE HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHC GNGYYHWCRFNKNYPVNINHVIHYSDHKAVNDLRYAISYLAKREQKECGIILKCSGLPEK CCCEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCC SNRGRPRLDSPLPGICALV CCCCCCCCCCCCCCHHHCC >Mature Secondary Structure MQTYNTNPAYEMAPQLLEHFNQHLDSLFGVYSKLLPFRMDFAYRKNTLSYRCACRYAMCA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH EMLQLINEVGEKLVGYAWVMEYTERKGLHIHFVGYLNGQSHRSSYLVSRLMGDIWRRVTE HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHC GNGYYHWCRFNKNYPVNINHVIHYSDHKAVNDLRYAISYLAKREQKECGIILKCSGLPEK CCCEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCC SNRGRPRLDSPLPGICALV CCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA