Definition | Shigella flexneri 2a str. 2457T, complete genome. |
---|---|
Accession | NC_004741 |
Length | 4,599,354 |
Click here to switch to the map view.
The map label for this gene is mltC
Identifier: 30064284
GI number: 30064284
Start: 3038705
End: 3039787
Strand: Direct
Name: mltC
Synonym: S3163
Alternate gene names: 30064284
Gene position: 3038705-3039787 (Clockwise)
Preceding gene: 30064283
Following gene: 30064285
Centisome position: 66.07
GC content: 50.88
Gene sequence:
>1083_bases ATGATGAAAAAATATCTCGCGCTGGCTTTGATTGCGCCGTTGCTCATCTCCTGTTCGACGACCAAAAAAGGCGATACCTA TAACGAAGCCTGGGTCAAAGATACCAACGGTTTTGATATTCTGATGGGGCAATTTGCCCACAATATTGAGAACATCTGGG GCTTCAAAGAGGTGGTGATCGCCGGTCCTAAGGACTACGTGAAATACACCGATCAATATCAGACCCGCAGCCACATCAAC TTCGATGACGGTACGATTACTATCGAAACCATCGCCGGGACAGAACCTGCCGCGCATTTGCGCCGGGCAATTATCAAAAC GTTGCTGATGGGTGACGATCCGAGTTCGGTCGATCTCTATTCCGACGTTGATGATATTACAATTTCGAAAGAACCTTTCC TTTACGGTCAGGTGGTGGACAACACCGGGCAGCCGATTCGCTGGGAAGGTCGCGCAAGCAACTTCGCGGATTATCTGCTG AAAAACCGTCTGAAAAGCCGCAGCAACGGGCTACGTATCATCTACAGCGTCACCATTAACATGGTGCCGAACCACCTTGA TAAACGTGCGCACAAATATCTCGGCATGGTCCGCCAGGCGTCACGGAAATATGGCGTTGATGAGTCGCTGATTCTGGCAA TTATGCAGACTGAATCTTCCTTTAACCCGTATGCGGTCAGCCGTTCCGATGCGCTGGGATTAATGCAGGTGGTACAAAAT ACTGCCGGGAAAGATGTGTTCCGCTCGCAGGGGAAATCCGGCACGCCGAGCCGCAGTTTCTTGTTTGATCCTGCCAGCAA TATTGATACCGGCACCGCGTATCTGGCGATGCTGAACAATGTTTATCTCGGCGGAATTGATAACCCAACATCGCGGCGTT ATGCCGTCATCACCGCCTATAACGGCGGCGCAGGCAGCGTGCTGCGAGTCTTTTCGAATGATAAGATTCAGGCTGCCAAT ATTATTAACACCATGACGCCGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCT TTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAA
Upstream 100 bases:
>100_bases GTGCATATCGAGGGCTATACGCCGGAAGATAAAAAATAAAAACAGTGCCGGAGCACGCCTCCGGCAGCTTGCATAAAAAC AAACACAACACGCACCCGGA
Downstream 100 bases:
>100_bases TTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTT TGCAATTATTTGCCACAGGT
Product: murein transglycosylase C
Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]
Alternate protein names: Murein hydrolase C [H]
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MMKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQFAHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHIN FDDGTITIETIAGTEPAAHLRRAIIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLL KNRLKSRSNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTESSFNPYAVSRSDALGLMQVVQN TAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAMLNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAAN IINTMTPGDVYQTLTTRHPSAESRRYLYKVNTAQKSYRRR
Sequences:
>Translated_360_residues MMKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQFAHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHIN FDDGTITIETIAGTEPAAHLRRAIIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLL KNRLKSRSNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTESSFNPYAVSRSDALGLMQVVQN TAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAMLNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAAN IINTMTPGDVYQTLTTRHPSAESRRYLYKVNTAQKSYRRR >Mature_360_residues MMKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQFAHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHIN FDDGTITIETIAGTEPAAHLRRAIIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLL KNRLKSRSNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTESSFNPYAVSRSDALGLMQVVQN TAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAMLNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAAN IINTMTPGDVYQTLTTRHPSAESRRYLYKVNTAQKSYRRR
Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transglycosylase slt family [H]
Homologues:
Organism=Escherichia coli, GI87082191, Length=359, Percent_Identity=99.7214484679666, Blast_Score=741, Evalue=0.0, Organism=Escherichia coli, GI87081855, Length=166, Percent_Identity=40.3614457831325, Blast_Score=137, Evalue=9e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008258 - InterPro: IPR000189 [H]
Pfam domain/function: PF01464 SLT [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 40221; Mature: 40221
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00922 TRANSGLYCOSYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQFAHNIENIWGFKEVVI CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCEEE AGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRAIIKTLLMGDDPSSVDLY ECCHHHHHHCCCHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEC SDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLKNRLKSRSNGLRIIYSVTIN CCCCCCEECCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEE MVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTESSFNPYAVSRSDALGLMQVVQN CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCEEECCHHHHHHHHHHHH TAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAMLNNVYLGGIDNPTSRRYAVITAY CCCHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCEEECCCCCCCCCEEEEEEEE NGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLTTRHPSAESRRYLYKVNTAQKSYRRR CCCCCCEEEEECCCCEEHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECHHHHHHCCC >Mature Secondary Structure MMKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQFAHNIENIWGFKEVVI CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCEEE AGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRAIIKTLLMGDDPSSVDLY ECCHHHHHHCCCHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEC SDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLKNRLKSRSNGLRIIYSVTIN CCCCCCEECCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEE MVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTESSFNPYAVSRSDALGLMQVVQN CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCEEECCHHHHHHHHHHHH TAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAMLNNVYLGGIDNPTSRRYAVITAY CCCHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCEEECCCCCCCCCEEEEEEEE NGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLTTRHPSAESRRYLYKVNTAQKSYRRR CCCCCCEEEEECCCCEEHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA