Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is 30064238
Identifier: 30064238
GI number: 30064238
Start: 3001278
End: 3001586
Strand: Direct
Name: 30064238
Synonym: S3115
Alternate gene names: NA
Gene position: 3001278-3001586 (Clockwise)
Preceding gene: 30064237
Following gene: 30064239
Centisome position: 65.25
GC content: 56.63
Gene sequence:
>309_bases ATGCATCCATTTACCTCATTAACACTGTGGGCATTAGCGGCCTGCACCACGCTTATCCTGCCCGCGCAGACCATTTTGCC GATCTATAGCGCGGCGACCTTTTTCTGCCTTATTGCGCTAAAGGCCACGCGGCGGCGGGCAAAATATGTCGTCTGGCTGA TGTTCTCGCTGGGAGCCGGGCTGTGGCTGGTACACGGTGGCTGGCTACCAGAATGGCTAAGCGGCACGCCACGCTCGCCA GAACGGTGGTCGCATGCTATTACGCTCTGGTTGCTGATTCTGGCGATTGTTTCAACCTCACAGTTGTGA
Upstream 100 bases:
>100_bases GGTCGATAAAATTCTTACAGCGGTGATTGTCTGGCTTTTACTGCGCCAGCTGCCGATTCGCACCACGCGCCATTTTCCGG CAATGGCTGCCGTGCGCTAA
Downstream 100 bases:
>100_bases ATGCAGTACGTCCCCGTGCAATGTTTTATTCGCGCTCTGTTTGCTTCTCGCCTGCCGCCAGGCGTCGCTTATCTGTTTGC CGGGCCGTTATTGGTCGTTG
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MHPFTSLTLWALAACTTLILPAQTILPIYSAATFFCLIALKATRRRAKYVVWLMFSLGAGLWLVHGGWLPEWLSGTPRSP ERWSHAITLWLLILAIVSTSQL
Sequences:
>Translated_102_residues MHPFTSLTLWALAACTTLILPAQTILPIYSAATFFCLIALKATRRRAKYVVWLMFSLGAGLWLVHGGWLPEWLSGTPRSP ERWSHAITLWLLILAIVSTSQL >Mature_102_residues MHPFTSLTLWALAACTTLILPAQTILPIYSAATFFCLIALKATRRRAKYVVWLMFSLGAGLWLVHGGWLPEWLSGTPRSP ERWSHAITLWLLILAIVSTSQL
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11436; Mature: 11436
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPFTSLTLWALAACTTLILPAQTILPIYSAATFFCLIALKATRRRAKYVVWLMFSLGAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LWLVHGGWLPEWLSGTPRSPERWSHAITLWLLILAIVSTSQL EEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHPFTSLTLWALAACTTLILPAQTILPIYSAATFFCLIALKATRRRAKYVVWLMFSLGAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LWLVHGGWLPEWLSGTPRSPERWSHAITLWLLILAIVSTSQL EEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA