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The map label for this gene is ppdC

Identifier: 30064165

GI number: 30064165

Start: 2917457

End: 2917807

Strand: Reverse

Name: ppdC

Synonym: S3031

Alternate gene names: 30064165

Gene position: 2917807-2917457 (Counterclockwise)

Preceding gene: 161486445

Following gene: 30064164

Centisome position: 63.44

GC content: 55.27

Gene sequence:

>351_bases
ATGTCAGCTTCCCTGAAGAATCAACAAGGCTTTAGCCTGCCGGAGGTAATGGTTGCGATGGTGCTGATGGTGCTGATGGT
GCTGATGGTGCTGATGGTGATGATTGTCACTGCGTTATCGGGTATCCAGCGAACATCAATGAACAGTCTCGCCAGCAGAA
ACCAGTACCAACAGCTCTGGCGGCATGGTTGGCAGCAAACGCAACTGCGCGCGATTTCGCCACCTGCCAACTGGCAGGTC
AACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAGTTTCACCCGGGGGCAGAGAAGGCGAGAT
GACCCGCCTGCATTGCCCGAATTGTCAGTAG

Upstream 100 bases:

>100_bases
AAGGCGTTTCGTTGTGGCGAACAGGCGAAGTCATTGATGGAAAAATTGTTTTTTCGCCACGCGGCTGGAGCGATTTTTGT
CCGCTGAAAGAGGGGGCATT

Downstream 100 bases:

>100_bases
TCAGGAGCCGCTATGTTAAGGGTCTACCATTCCAATCGTCTGGACGTGCTGGAAGCGTTGATGGAGTTTATTGTCGAACG
CGAACGGCTGGACGATCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSASLKNQQGFSLPEVMVAMVLMVLMVLMVLMVMIVTALSGIQRTSMNSLASRNQYQQLWRHGWQQTQLRAISPPANWQV
NRMQTSQAGCVSISVTLVSPGGREGEMTRLHCPNCQ

Sequences:

>Translated_116_residues
MSASLKNQQGFSLPEVMVAMVLMVLMVLMVLMVMIVTALSGIQRTSMNSLASRNQYQQLWRHGWQQTQLRAISPPANWQV
NRMQTSQAGCVSISVTLVSPGGREGEMTRLHCPNCQ
>Mature_115_residues
SASLKNQQGFSLPEVMVAMVLMVLMVLMVLMVMIVTALSGIQRTSMNSLASRNQYQQLWRHGWQQTQLRAISPPANWQVN
RMQTSQAGCVSISVTLVSPGGREGEMTRLHCPNCQ

Specific function: Not yet known [H]

COG id: COG4967

COG function: function code NU; Tfp pilus assembly protein PilV

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789187, Length=116, Percent_Identity=88.7931034482759, Blast_Score=201, Evalue=8e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022204
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF12528 DUF3728 [H]

EC number: NA

Molecular weight: Translated: 12907; Mature: 12776

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
9.5 %Met     (Translated Protein)
12.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
8.7 %Met     (Mature Protein)
11.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASLKNQQGFSLPEVMVAMVLMVLMVLMVLMVMIVTALSGIQRTSMNSLASRNQYQQLW
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHGWQQTQLRAISPPANWQVNRMQTSQAGCVSISVTLVSPGGREGEMTRLHCPNCQ
HCCCCCCCEEEECCCCCCEEHHEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
SASLKNQQGFSLPEVMVAMVLMVLMVLMVLMVMIVTALSGIQRTSMNSLASRNQYQQLW
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHGWQQTQLRAISPPANWQVNRMQTSQAGCVSISVTLVSPGGREGEMTRLHCPNCQ
HCCCCCCCEEEECCCCCCEEHHEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503; 7934814 [H]