Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is 30064095

Identifier: 30064095

GI number: 30064095

Start: 2830351

End: 2830914

Strand: Direct

Name: 30064095

Synonym: S2953

Alternate gene names: NA

Gene position: 2830351-2830914 (Clockwise)

Preceding gene: 30064092

Following gene: 30064098

Centisome position: 61.54

GC content: 42.91

Gene sequence:

>564_bases
ATGAGAAAAGCACCCCAAGGTTCTTTTCCTGCCGATGGAAAAGAACCGATTATCGAAAGAATCTTTAGGTTAGTAGAACG
ATACCCTTCAAGAAATGCGGCTGCTCGGGCATGGGGGATCAATGAAGGCACTTTAAAAAATTATTACAACAGGCGGGATT
ACGCACCGATACCACGCCCGTATCAGTTAAAAAAGATAGCAGAAAGCGAAAATGTTACCTTGGAATGGCTCATGACGGGA
GAGGGTGATGTTGAACTAAAAGATTCCAAAGAACCCAAAAAAGAGAATGCGGATAATGTTGATGCTCAAATTCTAATGTT
CTTGTCATTTCTTAAACCACAAGAAAAACAACAAGTAGCTGATGTTCTTGGGAGAAAAGGAGCGGAGCAATTACTCATTC
TTCTGGATGAGCACATCCAAGAGTTGCACGCTCTAGTTGGAGTTCGTAGAGCCATAGCGTTAAGCCTTGGTAATTTGCCA
GACGAAAAGGTTAGAGAGATTTACGCGTTGTCCGAAGCTAAGGGCGATCACTTAAATCTACCTCAGAAAGCAGCCAGCGC
ATAA

Upstream 100 bases:

>100_bases
TAAGATACCAAAGATTCCCTGCAAAGGGTTCTTTGGTGTTTTTATGGTTTATTTTTTAATTTTATTATTTATCAATGAAT
TAGATAGAAAGGAACCAAGA

Downstream 100 bases:

>100_bases
CCCAGTGCAAGTGCCTAGCTGTGCTAAAATTACATTGGTTTTGGCGCTTGCACCCATCAGCGCTATAATAAACACCTGAA
TCGTTTTTGAACGGTCTTTA

Product: putative regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRKAPQGSFPADGKEPIIERIFRLVERYPSRNAAARAWGINEGTLKNYYNRRDYAPIPRPYQLKKIAESENVTLEWLMTG
EGDVELKDSKEPKKENADNVDAQILMFLSFLKPQEKQQVADVLGRKGAEQLLILLDEHIQELHALVGVRRAIALSLGNLP
DEKVREIYALSEAKGDHLNLPQKAASA

Sequences:

>Translated_187_residues
MRKAPQGSFPADGKEPIIERIFRLVERYPSRNAAARAWGINEGTLKNYYNRRDYAPIPRPYQLKKIAESENVTLEWLMTG
EGDVELKDSKEPKKENADNVDAQILMFLSFLKPQEKQQVADVLGRKGAEQLLILLDEHIQELHALVGVRRAIALSLGNLP
DEKVREIYALSEAKGDHLNLPQKAASA
>Mature_187_residues
MRKAPQGSFPADGKEPIIERIFRLVERYPSRNAAARAWGINEGTLKNYYNRRDYAPIPRPYQLKKIAESENVTLEWLMTG
EGDVELKDSKEPKKENADNVDAQILMFLSFLKPQEKQQVADVLGRKGAEQLLILLDEHIQELHALVGVRRAIALSLGNLP
DEKVREIYALSEAKGDHLNLPQKAASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21115; Mature: 21115

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKAPQGSFPADGKEPIIERIFRLVERYPSRNAAARAWGINEGTLKNYYNRRDYAPIPRP
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCC
YQLKKIAESENVTLEWLMTGEGDVELKDSKEPKKENADNVDAQILMFLSFLKPQEKQQVA
HHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH
DVLGRKGAEQLLILLDEHIQELHALVGVRRAIALSLGNLPDEKVREIYALSEAKGDHLNL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PQKAASA
CHHHCCC
>Mature Secondary Structure
MRKAPQGSFPADGKEPIIERIFRLVERYPSRNAAARAWGINEGTLKNYYNRRDYAPIPRP
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCC
YQLKKIAESENVTLEWLMTGEGDVELKDSKEPKKENADNVDAQILMFLSFLKPQEKQQVA
HHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH
DVLGRKGAEQLLILLDEHIQELHALVGVRRAIALSLGNLPDEKVREIYALSEAKGDHLNL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PQKAASA
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA