Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is 30064095
Identifier: 30064095
GI number: 30064095
Start: 2830351
End: 2830914
Strand: Direct
Name: 30064095
Synonym: S2953
Alternate gene names: NA
Gene position: 2830351-2830914 (Clockwise)
Preceding gene: 30064092
Following gene: 30064098
Centisome position: 61.54
GC content: 42.91
Gene sequence:
>564_bases ATGAGAAAAGCACCCCAAGGTTCTTTTCCTGCCGATGGAAAAGAACCGATTATCGAAAGAATCTTTAGGTTAGTAGAACG ATACCCTTCAAGAAATGCGGCTGCTCGGGCATGGGGGATCAATGAAGGCACTTTAAAAAATTATTACAACAGGCGGGATT ACGCACCGATACCACGCCCGTATCAGTTAAAAAAGATAGCAGAAAGCGAAAATGTTACCTTGGAATGGCTCATGACGGGA GAGGGTGATGTTGAACTAAAAGATTCCAAAGAACCCAAAAAAGAGAATGCGGATAATGTTGATGCTCAAATTCTAATGTT CTTGTCATTTCTTAAACCACAAGAAAAACAACAAGTAGCTGATGTTCTTGGGAGAAAAGGAGCGGAGCAATTACTCATTC TTCTGGATGAGCACATCCAAGAGTTGCACGCTCTAGTTGGAGTTCGTAGAGCCATAGCGTTAAGCCTTGGTAATTTGCCA GACGAAAAGGTTAGAGAGATTTACGCGTTGTCCGAAGCTAAGGGCGATCACTTAAATCTACCTCAGAAAGCAGCCAGCGC ATAA
Upstream 100 bases:
>100_bases TAAGATACCAAAGATTCCCTGCAAAGGGTTCTTTGGTGTTTTTATGGTTTATTTTTTAATTTTATTATTTATCAATGAAT TAGATAGAAAGGAACCAAGA
Downstream 100 bases:
>100_bases CCCAGTGCAAGTGCCTAGCTGTGCTAAAATTACATTGGTTTTGGCGCTTGCACCCATCAGCGCTATAATAAACACCTGAA TCGTTTTTGAACGGTCTTTA
Product: putative regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRKAPQGSFPADGKEPIIERIFRLVERYPSRNAAARAWGINEGTLKNYYNRRDYAPIPRPYQLKKIAESENVTLEWLMTG EGDVELKDSKEPKKENADNVDAQILMFLSFLKPQEKQQVADVLGRKGAEQLLILLDEHIQELHALVGVRRAIALSLGNLP DEKVREIYALSEAKGDHLNLPQKAASA
Sequences:
>Translated_187_residues MRKAPQGSFPADGKEPIIERIFRLVERYPSRNAAARAWGINEGTLKNYYNRRDYAPIPRPYQLKKIAESENVTLEWLMTG EGDVELKDSKEPKKENADNVDAQILMFLSFLKPQEKQQVADVLGRKGAEQLLILLDEHIQELHALVGVRRAIALSLGNLP DEKVREIYALSEAKGDHLNLPQKAASA >Mature_187_residues MRKAPQGSFPADGKEPIIERIFRLVERYPSRNAAARAWGINEGTLKNYYNRRDYAPIPRPYQLKKIAESENVTLEWLMTG EGDVELKDSKEPKKENADNVDAQILMFLSFLKPQEKQQVADVLGRKGAEQLLILLDEHIQELHALVGVRRAIALSLGNLP DEKVREIYALSEAKGDHLNLPQKAASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21115; Mature: 21115
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKAPQGSFPADGKEPIIERIFRLVERYPSRNAAARAWGINEGTLKNYYNRRDYAPIPRP CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCC YQLKKIAESENVTLEWLMTGEGDVELKDSKEPKKENADNVDAQILMFLSFLKPQEKQQVA HHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH DVLGRKGAEQLLILLDEHIQELHALVGVRRAIALSLGNLPDEKVREIYALSEAKGDHLNL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC PQKAASA CHHHCCC >Mature Secondary Structure MRKAPQGSFPADGKEPIIERIFRLVERYPSRNAAARAWGINEGTLKNYYNRRDYAPIPRP CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCC YQLKKIAESENVTLEWLMTGEGDVELKDSKEPKKENADNVDAQILMFLSFLKPQEKQQVA HHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH DVLGRKGAEQLLILLDEHIQELHALVGVRRAIALSLGNLPDEKVREIYALSEAKGDHLNL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC PQKAASA CHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA