Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yqaB
Identifier: 30064055
GI number: 30064055
Start: 2785470
End: 2786036
Strand: Reverse
Name: yqaB
Synonym: S2904
Alternate gene names: 30064055
Gene position: 2786036-2785470 (Counterclockwise)
Preceding gene: 30064056
Following gene: 30064054
Centisome position: 60.57
GC content: 53.44
Gene sequence:
>567_bases ATGTACGAGCGTTATGCAGGTTTAATTTTTGATATGGATGGCACAATCCTGGATACGGCGCCTACGCACCGTAAAGCGTG GCGCGAAGTATTAGGGCACTACGGTCTTCAGTACGATATTCAGGCGATGATTGCGCTTAATGGATCGCCCACCTGGCGTA TTGCTCAGGCAATTATTGAGCTGAATCAGGCCGATCTCGACCCGCATGCGTTAGCGCGTGAAAAAACAGAAGCAGTAAGA AGTATGCTGCTGGATAGTGTCGAGCCGCTTCCTCTTGTTGAAGTGGTGAAAAGTTGGCATGGTCGTCGCCCAATGGCTGT AGGAACGGGGAGTGAAAGCGCCATCGCTGAGGCATTGCTGGCGCACCTGGGATTACGCCGTTATTTTGACGCCGTCGTCG CTGCTGATCACGTCAAACACCATAAACCCGCGCCAGACACATTTTTGTTGTGCGCGCAGCGTATGGGCGTGCAACCGACG CAGTGTGTGGTCTTTGAAGATGCCGATTTCGGTATTCAGGCGGCCCGTGCAGCAGGCATGGACGCTGTGGATGTTCGCTT GCTGTGA
Upstream 100 bases:
>100_bases ACTTTATCCATTTCCTGAATTTTCTTCTCCTTCGCCATCAGCGACAAAATCAAGCAATTACGCTAAAGTAGCGTCATATT TTTCGACTTGCGAGAAGACC
Downstream 100 bases:
>100_bases GTGAAGCGTTATCGCTTTTCTCGTTGTTTGCCAGTAGTTTTCTCAGCGCTACACTATTACCCGGCAACTCCGAAGTCGTG CTGGTGGCAATGTTGCTTTC
Product: fructose-1-phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MYERYAGLIFDMDGTILDTAPTHRKAWREVLGHYGLQYDIQAMIALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVR SMLLDSVEPLPLVEVVKSWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPT QCVVFEDADFGIQAARAAGMDAVDVRLL
Sequences:
>Translated_188_residues MYERYAGLIFDMDGTILDTAPTHRKAWREVLGHYGLQYDIQAMIALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVR SMLLDSVEPLPLVEVVKSWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPT QCVVFEDADFGIQAARAAGMDAVDVRLL >Mature_188_residues MYERYAGLIFDMDGTILDTAPTHRKAWREVLGHYGLQYDIQAMIALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVR SMLLDSVEPLPLVEVVKSWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPT QCVVFEDADFGIQAARAAGMDAVDVRLL
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates fructose 1-phosphate and 6-phosphogluconate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=190, Percent_Identity=34.2105263157895, Blast_Score=84, Evalue=7e-17, Organism=Homo sapiens, GI207113149, Length=213, Percent_Identity=30.5164319248826, Blast_Score=70, Evalue=8e-13, Organism=Escherichia coli, GI1789046, Length=188, Percent_Identity=98.4042553191489, Blast_Score=379, Evalue=1e-107, Organism=Escherichia coli, GI1787576, Length=191, Percent_Identity=29.8429319371728, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1788021, Length=184, Percent_Identity=30.9782608695652, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789787, Length=207, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=4e-12, Organism=Drosophila melanogaster, GI17137324, Length=185, Percent_Identity=31.8918918918919, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI116008157, Length=188, Percent_Identity=29.7872340425532, Blast_Score=74, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 20755; Mature: 20755
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYERYAGLIFDMDGTILDTAPTHRKAWREVLGHYGLQYDIQAMIALNGSPTWRIAQAIIE CCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHH LNQADLDPHALAREKTEAVRSMLLDSVEPLPLVEVVKSWHGRRPMAVGTGSESAIAEALL HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHH AHLGLRRYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAAGM HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCC DAVDVRLL CCEEEEEC >Mature Secondary Structure MYERYAGLIFDMDGTILDTAPTHRKAWREVLGHYGLQYDIQAMIALNGSPTWRIAQAIIE CCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHH LNQADLDPHALAREKTEAVRSMLLDSVEPLPLVEVVKSWHGRRPMAVGTGSESAIAEALL HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHH AHLGLRRYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAAGM HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCC DAVDVRLL CCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]