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The map label for this gene is recO

Identifier: 30063967

GI number: 30063967

Start: 2692400

End: 2693128

Strand: Reverse

Name: recO

Synonym: S2800

Alternate gene names: 30063967

Gene position: 2693128-2692400 (Counterclockwise)

Preceding gene: 30063968

Following gene: 30063966

Centisome position: 58.55

GC content: 53.36

Gene sequence:

>729_bases
ATGGAAGGCTGGCAGCGCGCATTTGTCCTGCATAGTCGCCCGTGGAGCGAAACCAGCCTGATGCTGGACGTCTTCACAGA
GGAATCGGGTCGCGTGCGTCTGGTTGCCAAAGGCGCACGCTCTAAACGCTCTACTCTGAAAGGTGCATTACAGCCTTTCA
CCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGCGCAGTGCTGAAGCTGTCTCACTGGCGCTGCCA
TTAAGCGGTATCACGCTTTACAGCGGTCTGTACATCAACGAACTTCTCTCCCGCGTACTGGAATACGAGACGCGCTTCTC
TGAACTCTTTTTCGATTACTTGCACTGCATTCAGTCTCTTGCAGGTGACACTGGTACGCCAGAACCCGCGCTGCGTCGCT
TTGAACTGGCACTACTCGGGCATCTGGGCTATGGCGTCAATTTTACCCATTGCGCGGGTAGCGGCGAGCCGGTAGATGGC
ACCATGACGTATCGTTATCGCGAAGAAAAAGGGTTTATCGCAAGCGTCGTTATCGACAATAAAACGTTCACCGGAAGGCA
GTTAAAAGCGTTAAACGCGCGGGAATTTCCTGACGCAGACACACTACGCGCCGCGAAACGCTTTACCCGAATGGCGCTTA
AGCCGTATCTTGGCGGTAAACCATTAAAGAGCAGGGAACTGTTCCGGCAGTTTATGCCTAAGCGAACGGTGAAAACACAT
TATGAATGA

Upstream 100 bases:

>100_bases
TCCACCTTGAACTGTGGGTAAAAGTGAAATCGGGTTGGGCCGACGACGAACGCGCACTGCGCAGTCTCGGTTATGTTGAC
GATCTTTAAGAGTCACTCCG

Downstream 100 bases:

>100_bases
TGAGGATTGTCATGGCTGAATTACTGTTAGGCGTCAACATTGACCATATTGCAACGCTGCGTAACGCACGCGGTACTGCT
TACCCGGATCCGGTGCAGGC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALP
LSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSLAGDTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDG
TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTH
YE

Sequences:

>Translated_242_residues
MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALP
LSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSLAGDTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDG
TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTH
YE
>Mature_242_residues
MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALP
LSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSLAGDTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDG
TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTH
YE

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=242, Percent_Identity=99.1735537190083, Blast_Score=487, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 27349; Mature: 27349

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRF
CCCHHEEEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHC
GGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSL
CCCCCHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGDTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDGTMTYRYREEKGFIASVVIDN
HCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCCCEEEEEECC
KTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTH
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHCC
YE
CC
>Mature Secondary Structure
MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRF
CCCHHEEEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHC
GGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSL
CCCCCHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGDTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDGTMTYRYREEKGFIASVVIDN
HCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCCCEEEEEECC
KTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTH
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHCC
YE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA