Definition | Shigella flexneri 2a str. 2457T, complete genome. |
---|---|
Accession | NC_004741 |
Length | 4,599,354 |
Click here to switch to the map view.
The map label for this gene is 30063963
Identifier: 30063963
GI number: 30063963
Start: 2689707
End: 2690108
Strand: Reverse
Name: 30063963
Synonym: S2796
Alternate gene names: NA
Gene position: 2690108-2689707 (Counterclockwise)
Preceding gene: 30063965
Following gene: 30063962
Centisome position: 58.49
GC content: 51.49
Gene sequence:
>402_bases ATGCCGCGCACTGTAACACATAATCCGGATAGCCCCAATAATGACGATGTTTTAGCCGCATCTGAAAAATGGGACGCCTG TAAACCCCCCTATACCAGCGCACACATGAAAATCTGTGTTGCTGCCGCCAAAATCATCCTCGCTGCTTCCGGCGTGGCTC GCTGTTCCAAATACGAAAAAGAGAACTATCTCCGTATCGATTTCAGCAAAGCCGGTAAGGTTACATTTTACGCCGAGTTT CCAAAAAAGATGGGCCTCAAAGGTAAAAAGCTCGGCGAGTGGCCGGAGCTCGTTATCCAGCTGGCGCGCGAAAAAGCACT AGGTATGGCTGACGGTGGACTGCGGGCAGAGTCCGTACATGCAGCGCTGGAAATGTACCGGGATGACCCAAAGCCAAAGT AG
Upstream 100 bases:
>100_bases AGTCCAGCAACACAAAACCGCAACACATTGCATTTTGTCCCGTAGAAAAGACTTGTATGTGTGAGCTTGTTTTCTGCGCC TACGCAGATAAGGATTGAGA
Downstream 100 bases:
>100_bases CCCGGCAGAAGCTGAGCCCGGACAGTTTCACAACCTACGGGGTGCGTATCGACCGGATTAAAGTAACGTTCGGCGAGCGT GAGGTGTTCAGCGACGTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MPRTVTHNPDSPNNDDVLAASEKWDACKPPYTSAHMKICVAAAKIILAASGVARCSKYEKENYLRIDFSKAGKVTFYAEF PKKMGLKGKKLGEWPELVIQLAREKALGMADGGLRAESVHAALEMYRDDPKPK
Sequences:
>Translated_133_residues MPRTVTHNPDSPNNDDVLAASEKWDACKPPYTSAHMKICVAAAKIILAASGVARCSKYEKENYLRIDFSKAGKVTFYAEF PKKMGLKGKKLGEWPELVIQLAREKALGMADGGLRAESVHAALEMYRDDPKPK >Mature_132_residues PRTVTHNPDSPNNDDVLAASEKWDACKPPYTSAHMKICVAAAKIILAASGVARCSKYEKENYLRIDFSKAGKVTFYAEFP KKMGLKGKKLGEWPELVIQLAREKALGMADGGLRAESVHAALEMYRDDPKPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14695; Mature: 14564
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTVTHNPDSPNNDDVLAASEKWDACKPPYTSAHMKICVAAAKIILAASGVARCSKYEK CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC ENYLRIDFSKAGKVTFYAEFPKKMGLKGKKLGEWPELVIQLAREKALGMADGGLRAESVH CCEEEEEECCCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHH AALEMYRDDPKPK HHHHHHHCCCCCC >Mature Secondary Structure PRTVTHNPDSPNNDDVLAASEKWDACKPPYTSAHMKICVAAAKIILAASGVARCSKYEK CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC ENYLRIDFSKAGKVTFYAEFPKKMGLKGKKLGEWPELVIQLAREKALGMADGGLRAESVH CCEEEEEECCCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHH AALEMYRDDPKPK HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA