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The map label for this gene is yeiN

Identifier: 30063606

GI number: 30063606

Start: 2259308

End: 2260246

Strand: Reverse

Name: yeiN

Synonym: S2379

Alternate gene names: 30063606

Gene position: 2260246-2259308 (Counterclockwise)

Preceding gene: 30063607

Following gene: 30063605

Centisome position: 49.14

GC content: 49.2

Gene sequence:

>939_bases
ATGTCTGAATTAAAAATTTCCCCTGAATTATTACAAATTTCTCCGGAAGTGCAGGACGCTTTAAAAAACAAAAAACCGGT
TGTGGCGCTGGAATCGACCATTATTTCTCACGGGATGCCGTTCCCACAAAATGCCCAGACCGCAATTGAAGTAGAAGAAA
CTATTCGTAAACAGGGCGCAGTACCTGCCACTATCGCCATTATTGGCGGCGTGATGAAAGTGGGTTTAAGCAAAGAAAAA
ATTGAATTACTGGGTCGTGAAGGGCATAACGTGACCAAAGTTAGTCGTCGCGATTTACCTTTTGTTGTTGCCGCCGGAAA
AAATGGCGCAACCACTGTGGCTTCAACGATGATTATTGCGGCGCTTGCCGGAATTAAAGTATTTGCCACCGGGGGAATTG
GTGGTGTGCATCGCGGGGCGGAACATACCTTCGATATTTCTGCCGATTTGCAAGAACTGGCAAATACTAATGTCACCGTT
GTTTGTGCCGGGGCGAAATCTATTCTCGATTTAGGATTAACCACTGAGTATTTAGAAACCTTCGGTGTGCCGTTAATTGG
CTATCAGACTAAAGCGCTGCCTGCGTTTTTCTGCCGTACCAGCTCGTTTGACGTCAGCATTCGTCTCGACAGCGCCAGTG
AAATTGCCCGTGCAATGGCGGTGAAATGGCAAAGCGGGCTGAACGGTGGCCTCGTGGTAGCGAACCCGATCCCGGAACAG
TTTGCGATGCCGGAGGAATCTATCAATGCAGCCATAGATCAAGCCGTCGCCGAAGCCGAAGAGCAGGGCGTTATTGGTAA
AGAAAGTACACCGTTCCTGCTGGCGCGCGTTGCTGAGCTGACCAGCGGTGACAGCCTGAAATCCAATATCCAGCTGGTGT
TCAACAACGCCATTCTGGCGAGTGAAATTGCCAAAGAATACCAGCGTCTCGCGGGTTAA

Upstream 100 bases:

>100_bases
GTTTCGCACAGGGATGTTCGTCAATGGCGCTCTCCTGTGAATACACCAATAACCCCGATTTATCGATTGCCAACGTTATA
TCGTTAGTGGAGAACGCAGA

Downstream 100 bases:

>100_bases
TTTCTGACGGGCAGAAAGCCGTCGCCCGTACTCATCAAGCATACCAAAACCTGGCGCTGACGCCGGGTTTACTGGCATGA
AGGGAAAATCATTATGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: PsiMP glycosidase [H]

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MSELKISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEK
IELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTV
VCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSSFDVSIRLDSASEIARAMAVKWQSGLNGGLVVANPIPEQ
FAMPEESINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTSGDSLKSNIQLVFNNAILASEIAKEYQRLAG

Sequences:

>Translated_312_residues
MSELKISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEK
IELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTV
VCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSSFDVSIRLDSASEIARAMAVKWQSGLNGGLVVANPIPEQ
FAMPEESINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTSGDSLKSNIQLVFNNAILASEIAKEYQRLAG
>Mature_311_residues
SELKISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEKI
ELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVV
CAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSSFDVSIRLDSASEIARAMAVKWQSGLNGGLVVANPIPEQF
AMPEESINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTSGDSLKSNIQLVFNNAILASEIAKEYQRLAG

Specific function: Catalyzes the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil. In vitro, can also catalyze the reverse reaction [H]

COG id: COG2313

COG function: function code Q; Uncharacterized enzyme involved in pigment biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pseudouridine-5'-phosphate glycosidase family [H]

Homologues:

Organism=Escherichia coli, GI1788490, Length=312, Percent_Identity=97.7564102564102, Blast_Score=615, Evalue=1e-177,
Organism=Caenorhabditis elegans, GI25147470, Length=297, Percent_Identity=51.1784511784512, Blast_Score=281, Evalue=3e-76,
Organism=Drosophila melanogaster, GI24580669, Length=295, Percent_Identity=51.864406779661, Blast_Score=287, Evalue=7e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022830
- InterPro:   IPR007342 [H]

Pfam domain/function: PF04227 Indigoidine_A [H]

EC number: NA

Molecular weight: Translated: 32937; Mature: 32806

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELKISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGA
CCCCCCCHHHEEECHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
VPATIAIIGGVMKVGLSKEKIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIA
CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHH
ALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGLTTEYLET
HHHCCEEEEECCCCCCCCCCCCEEECCHHHHHHCCCCEEEEECCHHHHHHHCCHHHHHHH
FGVPLIGYQTKALPAFFCRTSSFDVSIRLDSASEIARAMAVKWQSGLNGGLVVANPIPEQ
HCCCEECCCHHCCHHHEEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCHH
FAMPEESINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTSGDSLKSNIQLVFNNAILA
HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHCCEEEEECCHHHH
SEIAKEYQRLAG
HHHHHHHHHHCC
>Mature Secondary Structure 
SELKISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGA
CCCCCCHHHEEECHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
VPATIAIIGGVMKVGLSKEKIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIA
CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHH
ALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGLTTEYLET
HHHCCEEEEECCCCCCCCCCCCEEECCHHHHHHCCCCEEEEECCHHHHHHHCCHHHHHHH
FGVPLIGYQTKALPAFFCRTSSFDVSIRLDSASEIARAMAVKWQSGLNGGLVVANPIPEQ
HCCCEECCCHHCCHHHEEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCHH
FAMPEESINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTSGDSLKSNIQLVFNNAILA
HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHCCEEEEECCHHHH
SEIAKEYQRLAG
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]