Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yeiB
Identifier: 30063595
GI number: 30063595
Start: 2243826
End: 2244902
Strand: Reverse
Name: yeiB
Synonym: S2366
Alternate gene names: 30063595
Gene position: 2244902-2243826 (Counterclockwise)
Preceding gene: 30063596
Following gene: 30063594
Centisome position: 48.81
GC content: 54.6
Gene sequence:
>1077_bases ATGGAGCGCAACGTCACGCTCGATTTTGTTCGCGGCGTCGCCATTCTGGGGATCCTGCTATTAAACATCAGCGCCTTTGG GCTACCAAAGGCGGCTTATCTCAATCCCGCCTGGTACGATGCTATTACGCCGCAGGATGCATGGACCTGGGCATTTCTCG ATCTCATCGGCCAGGTGAAATTCCTCACGCTTTTTGCGCTGCTGTTTGGTGCTGGCCTGCAAATGTTGCTGCCCCGTGGC AGACGCTGGATCCAGTCGCGGTTAACGCTGTTAGTCTTGTTGGGCTTTATTCACGGTTTATTGTTCTGGGACGGCGATAT TCTGCTGGCTTACGGGCTGGTGGGGCTTGGCGTTTTGCTGTTATTGGGGCTGATTTCCGACAGCCAGACCAGCCGCGCCT GGACGCCGGATGCATCGGCTATTTTGTATGAAAAATACTGGAAGCTTCACGGCGGCGTTGAAGCGATCAGTAATCGTGCC GATGGTGTTGGCAACAGTTTACTGGCACTGGGCGCACAGTATGGCTGGCAACTGGCAGGGATGATGCTCATTGGTGCGGC GCTGATGCGCAGCGGCTGGCTGAAAGGGCAGTTCAGCTTACGTCACTATCGTCGTACTGGTTTTGTGCTGGTGGCGATTG GGGTGACCATTAACCTTCCTGCCATCGCCCTGCAATGGCAGCTGGACTGGGCGTATCGCTGGTGTGCCTTCTTACTTCAA ATGCCGCGGGAACTGAGTGCGCCGTTTCAGGCGATTGGCTATGCGTCGCTGTTTTATGGCTTCTGGCCGCAATTGAGCCG CTTTAAGCTGGTGCTTGCGATCGCCTGCGTCGGACGGATGGCGCTGACCAACTATCTATTGCAAACGCTGATTTGTACCA CGCTTTTTTACCACCTCGGTTTGTTTATGCATTTTGACCGCCTGGAGCTGCTGGCGTTTGTTATTCCGGTATGGCTGGCG AATATCCTCTTCTCTGTTATCTGGCTGCGTTACTTCCGCCAGGGGCCGGTGGAATGGCTCTGGCGTCAGTTAACTTTGCG TGCTGCCGGACCGGCAATATCTAAAACATCAAGATAA
Upstream 100 bases:
>100_bases ACAACGACCTCTCTTGGTGGATTGTTCAAATCCAGTCAGAATACGCGCCACGAGTTTCTGCGCGCTGTGCGCCATCACAA CTGATTAAAAGGCAGGAACC
Downstream 100 bases:
>100_bases CGATCTGGATTACATTCGTTAACAAAACGGCTGTAACCGTTTCCATTGCTGTGACTCGATTCACGAAGTCCTGTATTCAG TGCTGACAAAATAGCCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYDAITPQDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRG RRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRA DGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQ MPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLA NILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR
Sequences:
>Translated_358_residues MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYDAITPQDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRG RRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRA DGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQ MPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLA NILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR >Mature_358_residues MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYDAITPQDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRG RRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRA DGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQ MPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLA NILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR
Specific function: Involved in transport (Potential) [H]
COG id: COG2311
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yxaH and yrkO [H]
Homologues:
Organism=Escherichia coli, GI1788475, Length=385, Percent_Identity=91.4285714285714, Blast_Score=674, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007349 [H]
Pfam domain/function: PF04235 DUF418 [H]
EC number: NA
Molecular weight: Translated: 40390; Mature: 40390
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYDAITPQDAWTWAFLDLIGQVK CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHH FLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLGVLL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAG HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHH MMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQ HHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEECCEEECCEEEEEEEHHHHHHHHHHHHH MPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLG CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFMHFDRLELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYDAITPQDAWTWAFLDLIGQVK CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHH FLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLGVLL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAG HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHH MMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQ HHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEECCEEECCEEEEEEEHHHHHHHHHHHHH MPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLG CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFMHFDRLELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 1619663 [H]