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The map label for this gene is stfR [H]

Identifier: 30063566

GI number: 30063566

Start: 2212250

End: 2213584

Strand: Reverse

Name: stfR [H]

Synonym: S2332

Alternate gene names: 30063566

Gene position: 2213584-2212250 (Counterclockwise)

Preceding gene: 30063567

Following gene: 30063565

Centisome position: 48.13

GC content: 54.38

Gene sequence:

>1335_bases
ATGAACACTGTTGCTGATGTGATGGCAGGAAACGATGGTGAATACTGTTTCCATGCGCGGACTGGAAAATATGGTGTGTA
TCTGAAACAGGACTGGCGCAACGAGTACAACGTTGGCGACATTGCTGTATATGAGGACTCAAAGCCCGGCACGCTGAATG
ACTTTCTGATTGCTCCTGATGAGGGCGACCTGAAACCGGATGTCGTCAAACGCTTTGAGGAAATGGTGGCGCAGGCGCAG
CAGAGCGCCGGGGCCGCAGCCGGAAACGCACAGCAGACGGCGCAGGATGTGGCGGCAGCCGCAACGGCCCGTGATGATGC
ACAACGTTTTGCGGAGAAAGCCCGACAGGATGCAACCGTCACAGCTGAGGACAGAAAGGCCACTGCGGAAGATGTGACAA
GCACAGGAGCAAATGCAGCCGCAGCCGGACAGAGCGCACAGGATGCCGCAGGTTATGCCCGCGCAGCAGAGCAGGCCAAA
AATGACATTGATGCTGCGCTGACCGGCACTCTGAAAACGGCTAACCATCTGTCTGAAACCGCAGCAGCAGGCGAAAAGGC
ACAACAGAAGTCCCGGGATAATCTGGGGCTGAAAAGTGCGGCCACGATGGAAGCACAGAGCGACATTTACGACCGGACAA
AAGGCCGTCTGGCGATACCCGGCGCATTCGGCTTTGGGTGTGCTTTTCTGCCTGAAGATGTTATCCGTTTTGACACTAAG
AGTGATTTCCTGGCCTGGGTAAGGAATGCGCTGCCAGGTGAATATTCCGTTGCTGGCCCCTACGGCATCATCATACCCGA
CACACGGTTTGAAGGGGTGCTCAGCATCCGGTGGACTGATGCACGCCCTGAGACAACAGAACCGCGGTACAGAGCCAAAT
CCCTTACTTTTTACGGCATTAACGGCCCCATTTATCACACCCGCTACTGCTACTGGCCCATATCCAGACTGACTGGCTGG
GTGAAAATAAATATAACCACAGAAGATATTATTTACAGAATCGTGGCGAGCTCTGTCCGCAACAGATGGGGAGACCCTGA
CATTGGCGGGCTGATTATTGCTGCGTACCAGGGAGAAGCTGACGGTGATAAAGTCATCAGACTTGTCAGGGGGCAGTCAT
ACAGAGGCTCACGACTGGGACCGGTGGGGATTTCAGTGCCCGGTACTCCCACCGGAACGTATATAGTATCCCCACAATTT
TTCATTACGGGATGTTCAGAGCATTCATTACCGGGGTCATATTGCGCCCTGTCCGGGGTGCCGGATGCACATGTCTCTGG
CGCAATGCCCGGGCTTTTTATTCGCACATCGAGAGGAATGCACCGTGGAAATTAA

Upstream 100 bases:

>100_bases
TGTCTGTAGTGATATCAGGTGCGCTGACTGATGGCGCAGGTATCCCCATGTCCGGATACCATATTATTCTGAAATCCCGG
GTAAACCCCCGGAAGTGGTG

Downstream 100 bases:

>100_bases
AAAAATCATTAATCCCCGTTATACCGAAAGTGGCGCAGTAGACTGTGACGTTTTTTTTTGACGACAGGGACCAGGCAGTC
CCCTACACAGCCACCGCTGA

Product: putative phage tail fiber protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MNTVADVMAGNDGEYCFHARTGKYGVYLKQDWRNEYNVGDIAVYEDSKPGTLNDFLIAPDEGDLKPDVVKRFEEMVAQAQ
QSAGAAAGNAQQTAQDVAAAATARDDAQRFAEKARQDATVTAEDRKATAEDVTSTGANAAAAGQSAQDAAGYARAAEQAK
NDIDAALTGTLKTANHLSETAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTK
SDFLAWVRNALPGEYSVAGPYGIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTGW
VKINITTEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGISVPGTPTGTYIVSPQF
FITGCSEHSLPGSYCALSGVPDAHVSGAMPGLFIRTSRGMHRGN

Sequences:

>Translated_444_residues
MNTVADVMAGNDGEYCFHARTGKYGVYLKQDWRNEYNVGDIAVYEDSKPGTLNDFLIAPDEGDLKPDVVKRFEEMVAQAQ
QSAGAAAGNAQQTAQDVAAAATARDDAQRFAEKARQDATVTAEDRKATAEDVTSTGANAAAAGQSAQDAAGYARAAEQAK
NDIDAALTGTLKTANHLSETAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTK
SDFLAWVRNALPGEYSVAGPYGIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTGW
VKINITTEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGISVPGTPTGTYIVSPQF
FITGCSEHSLPGSYCALSGVPDAHVSGAMPGLFIRTSRGMHRGN
>Mature_444_residues
MNTVADVMAGNDGEYCFHARTGKYGVYLKQDWRNEYNVGDIAVYEDSKPGTLNDFLIAPDEGDLKPDVVKRFEEMVAQAQ
QSAGAAAGNAQQTAQDVAAAATARDDAQRFAEKARQDATVTAEDRKATAEDVTSTGANAAAAGQSAQDAAGYARAAEQAK
NDIDAALTGTLKTANHLSETAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTK
SDFLAWVRNALPGEYSVAGPYGIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTGW
VKINITTEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGISVPGTPTGTYIVSPQF
FITGCSEHSLPGSYCALSGVPDAHVSGAMPGLFIRTSRGMHRGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Escherichia coli, GI87081892, Length=89, Percent_Identity=41.5730337078652, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 47780; Mature: 47780

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVADVMAGNDGEYCFHARTGKYGVYLKQDWRNEYNVGDIAVYEDSKPGTLNDFLIAPD
CCCHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEECCC
EGDLKPDVVKRFEEMVAQAQQSAGAAAGNAQQTAQDVAAAATARDDAQRFAEKARQDATV
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
TAEDRKATAEDVTSTGANAAAAGQSAQDAAGYARAAEQAKNDIDAALTGTLKTANHLSET
EECCCCCCHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTK
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHCCHHHHHCCCC
SDFLAWVRNALPGEYSVAGPYGIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGI
HHHHHHHHHCCCCCEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCEECEEEEEEC
NGPIYHTRYCYWPISRLTGWVKINITTEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEA
CCCEEECEEEEEEHHHCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
DGDKVIRLVRGQSYRGSRLGPVGISVPGTPTGTYIVSPQFFITGCSEHSLPGSYCALSGV
CHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEECCCEEEECCCCCCCCCCEEEECCC
PDAHVSGAMPGLFIRTSRGMHRGN
CCHHHCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MNTVADVMAGNDGEYCFHARTGKYGVYLKQDWRNEYNVGDIAVYEDSKPGTLNDFLIAPD
CCCHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEECCC
EGDLKPDVVKRFEEMVAQAQQSAGAAAGNAQQTAQDVAAAATARDDAQRFAEKARQDATV
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
TAEDRKATAEDVTSTGANAAAAGQSAQDAAGYARAAEQAKNDIDAALTGTLKTANHLSET
EECCCCCCHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTK
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHCCHHHHHCCCC
SDFLAWVRNALPGEYSVAGPYGIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGI
HHHHHHHHHCCCCCEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCEECEEEEEEC
NGPIYHTRYCYWPISRLTGWVKINITTEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEA
CCCEEECEEEEEEHHHCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
DGDKVIRLVRGQSYRGSRLGPVGISVPGTPTGTYIVSPQFFITGCSEHSLPGSYCALSGV
CHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEECCCEEEECCCCCCCCCCEEEECCC
PDAHVSGAMPGLFIRTSRGMHRGN
CCHHHCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]