| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yehE
Identifier: 30063549
GI number: 30063549
Start: 2180328
End: 2180609
Strand: Reverse
Name: yehE
Synonym: S2301
Alternate gene names: 30063549
Gene position: 2180609-2180328 (Counterclockwise)
Preceding gene: 30063550
Following gene: 30063548
Centisome position: 47.41
GC content: 43.97
Gene sequence:
>282_bases ATGAATAAGTATTGGCTGTCAGGAATTATTTTTCTTGCCTATGGATTGGCTTCTCCCGCAGTCTCTTCAGAGACTGCCAC ATTAACGATTAATGGCAGGATCAGTCCCCCAACATGCAGTATGGCTATGGTTAATAGTCAACCACAACAGCATTGTGGTC AGTTAACGTATAATGTTGACACCCGTCATCAGGTTTCTTCGCCCGTCAAAGGTGTTACGACAGAAGTGGTTGTTGCAGGT AGCGATAGCAAACGTCGAATCGTGTTAAATCGCTACGATTAA
Upstream 100 bases:
>100_bases CTTCATTATCATCCTTCGTGCTGTGTAGTGGATGTACAGCTATAGTTTGTTATGCACTCATTCTATCCAGGCATAACCTT TACTACAGGGATAACGTTCA
Downstream 100 bases:
>100_bases TTTGGCAACCTGATTTTAATTGCATTTAGAAAGACGAAATCGGTAATGCTGCCAACTTACTGATTTAGTGTATGATGGTG ATTTTAAGGTGCTTGCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MNKYWLSGIIFLAYGLASPAVSSETATLTINGRISPPTCSMAMVNSQPQQHCGQLTYNVDTRHQVSSPVKGVTTEVVVAG SDSKRRIVLNRYD
Sequences:
>Translated_93_residues MNKYWLSGIIFLAYGLASPAVSSETATLTINGRISPPTCSMAMVNSQPQQHCGQLTYNVDTRHQVSSPVKGVTTEVVVAG SDSKRRIVLNRYD >Mature_93_residues MNKYWLSGIIFLAYGLASPAVSSETATLTINGRISPPTCSMAMVNSQPQQHCGQLTYNVDTRHQVSSPVKGVTTEVVVAG SDSKRRIVLNRYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788430, Length=93, Percent_Identity=94.6236559139785, Blast_Score=185, Evalue=5e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020386 - ProDom: PD064930 [H]
Pfam domain/function: PF10836 DUF2574 [H]
EC number: NA
Molecular weight: Translated: 10116; Mature: 10116
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKYWLSGIIFLAYGLASPAVSSETATLTINGRISPPTCSMAMVNSQPQQHCGQLTYNVD CCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHCEEEECCC TRHQVSSPVKGVTTEVVVAGSDSKRRIVLNRYD CCCCCCCCCCCCEEEEEEECCCCCCEEEEEECC >Mature Secondary Structure MNKYWLSGIIFLAYGLASPAVSSETATLTINGRISPPTCSMAMVNSQPQQHCGQLTYNVD CCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHCEEEECCC TRHQVSSPVKGVTTEVVVAGSDSKRRIVLNRYD CCCCCCCCCCCCEEEEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]