| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
Click here to switch to the map view.
The map label for this gene is fbaB [H]
Identifier: 30063538
GI number: 30063538
Start: 2166052
End: 2167104
Strand: Reverse
Name: fbaB [H]
Synonym: S2285
Alternate gene names: 30063538
Gene position: 2167104-2166052 (Counterclockwise)
Preceding gene: 30063540
Following gene: 30063537
Centisome position: 47.12
GC content: 51.38
Gene sequence:
>1053_bases ATGACAGATATTGCGCAGTTGCTTGGCAAAGACGCCGACAACCTTTTACAGCACCGTTGTATGACTATTCCTTCTGACCA GCTTTATCTCCCCGGACATGACTACGTAGACCGCGTGATGATTGACAATAATCGCCCGCCAGCGGTGTTACGTAATATGC AGACGTTGTACAACACCGGGCGTCTGGCTGGCACAGGATATCTTTCTATTCTGCCGGTTGACCAGGGCGTTGAGCACTCT GCCGGAGCTTCATTTGCTGCTAACCCGCTCTACTTTGACCCGAAAAACATTGTTGAACTGGCGATCGAAGCGGGCTGTAA CTGTGTGGCATCAACTTACGGCGTGTTGGTGTCGGTATCGCGGCGCTATGCGCATCGCATTCCATTTCTCGTCAAACTTA ATCACAACGAGACGCTAAGTTACCCGAATACCTACGATCAAACGCTGTATGCCAGCGTGGAGCAGGCCTTCAACATGGGC GCGGTGGCGGTTGGTGCGACTATCTATTTTGGCTCGGAAGAGTCACGTCGCCAGATTGAAGAAATTTCTGCGGCCTTTGA ACGCGCGCACGAGCTGGGCATGGTGACAGTGCTGTGGGCCTATTTGCGAAACTCCGCCTTTAAGAAAGATGGCGTTGATT ACCATGTTTCCGCCGACCTGACTGGTCAGGCGAACCATCTGGCGGCAACCATAGGTGCAGATATCGTCAAACAAAAAATG GCGGAAAATAACGGCGGCTATAAAGCGATTAATTACGGTTATACCGACGATCGCGTGTACAGCAAGTTAACCAGCGAAAA CCCGATTGATCTGGTGCGTTATCAGTTAGCTAACTGCTATATGGGCCGGGCTGGGTTGATAAACTCCGGCGGTGCTGCAG GCGGTGAAACTGACCTCAGCGATGCAGTGCGTACTGCGGTTATCAACAAACGCGCAGGCGGAATGGGGCTGATTCTTGGA CGTAAGGCGTTCAAGAAATCGATGGCTGACGGCGTGAAACTGATTAATGCCGTGCAGGACGTTTATCTCGATAGCAAAAT TACTATTGCCTGA
Upstream 100 bases:
>100_bases TCCCCATCGCATCCCCTAACGCCTGCCCATAAAGAGCACCGAGAATACGTTCTGTTTTCATTTAACTTCCCCTTGAATCG GAATTTACGGGAGCATAGTA
Downstream 100 bases:
>100_bases TACGCCTCATACGAACAGCACCACCCCGTAGGACGGATAAGACGTTTACACTGCATCCGGCAACCTATGCCTGATGCGAC GCGGAAGCGTCTTATCATGC
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHS AGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLVSVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG AVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILG RKAFKKSMADGVKLINAVQDVYLDSKITIA
Sequences:
>Translated_350_residues MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHS AGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLVSVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG AVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILG RKAFKKSMADGVKLINAVQDVYLDSKITIA >Mature_349_residues TDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSA GASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLVSVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGA VAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKMA ENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGR KAFKKSMADGVKLINAVQDVYLDSKITIA
Specific function: Unknown
COG id: COG1830
COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deoC/fbaB aldolase family. FbaB subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082042, Length=350, Percent_Identity=99.7142857142857, Blast_Score=721, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR002915 [H]
Pfam domain/function: PF01791 DeoC [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38138; Mature: 38006
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTG CCHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCHHHCEEEECCCCCHHHHHHHHHHHHCC RLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLVSVS CCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCHHHHHHHHHHHHH RRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIE HHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHH EISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLS HHCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH DAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA HHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC >Mature Secondary Structure TDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTG CHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCHHHCEEEECCCCCHHHHHHHHHHHHCC RLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLVSVS CCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCHHHHHHHHHHHHH RRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIE HHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHH EISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLS HHCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH DAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA HHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]