Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yegK [H]
Identifier: 30063518
GI number: 30063518
Start: 2140818
End: 2141579
Strand: Reverse
Name: yegK [H]
Synonym: S2261
Alternate gene names: 30063518
Gene position: 2141579-2140818 (Counterclockwise)
Preceding gene: 30063519
Following gene: 30063517
Centisome position: 46.56
GC content: 51.44
Gene sequence:
>762_bases GTGAGCTGGCGTCTGGTTTATGCATCCGCTGTTGGAACGTCGCACATCAGCGCGGACTTGCCTTGCCAGGATGCCTGCCA GATGCAGGTTGCCTGGCTAAATGACCAGCAGCCATTACTGGTGATGTTCCTTGCTGATGGCGCAGGTAGCGTTTCGCAGG GGGGCGAAGGCGCGATGCTCGCCGTCAATGAAGCGATGGCTTATATGTCGCAAAAAGTGCAGGGTGGGGAATTGGGGCTT AATGATATCCTCGCCACGGATATTGTGCTGACCGTTCGTCAGCGACTTTTTGCCGAGGCGGAAGCCAAAGAATTAGCAGT TCGCGATTTTGCCTGCACGTTTCTGGGATTGATTTCATCGGCTAATGGCACCTTGATTATGCAGATTGGCGATGGCGGCG TGGTGGTGGATTTTGGTCACGGTCTGCAATTGCCGCTTACGCCGATGGTGGGTGAATATGCCAATATGACGCACTTCATT ACCGATGAAGATGCCGTTTCCAGACTGGAAACTTTCACCAGCACTGAGCGTGTGCATAAAGTTGCAGCATTTACGGATGG TATCCAGCGACTGGCGTTAAATATGTTGGATAATTCTCCGCATGTGCCTTTCTTTACCCCGTTTTTCAATGGACTGGCGT CAGCAACGCAGGAACAACTCGATTTATTACCTGAATTGTTAAAGCAGTTTTTGTCCAGCCCGGCGGTAAACGAGCGTACG GATGATGATAAAACGTTGGCACTGGCGCTGTGGTTACCATGA
Upstream 100 bases:
>100_bases GTGAACTGTTTAGCTGGTTATCCAGTTCGCTGCGTTCGGTTTCCCGCTCCACGCCGGGAACGGAAGTTGTGCTGGAAGCG CCAAAAGGCTGGACGTCAGT
Downstream 100 bases:
>100_bases AACCCACTTTATATACTGCTACTGGTGAGTGCGTTACGCCAGGCCGTGAACTGGGCAAAGGCGGTGAAGGCGCGGTTTAT GATATCAATGAGTTTGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSWRLVYASAVGTSHISADLPCQDACQMQVAWLNDQQPLLVMFLADGAGSVSQGGEGAMLAVNEAMAYMSQKVQGGELGL NDILATDIVLTVRQRLFAEAEAKELAVRDFACTFLGLISSANGTLIMQIGDGGVVVDFGHGLQLPLTPMVGEYANMTHFI TDEDAVSRLETFTSTERVHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASATQEQLDLLPELLKQFLSSPAVNERT DDDKTLALALWLP
Sequences:
>Translated_253_residues MSWRLVYASAVGTSHISADLPCQDACQMQVAWLNDQQPLLVMFLADGAGSVSQGGEGAMLAVNEAMAYMSQKVQGGELGL NDILATDIVLTVRQRLFAEAEAKELAVRDFACTFLGLISSANGTLIMQIGDGGVVVDFGHGLQLPLTPMVGEYANMTHFI TDEDAVSRLETFTSTERVHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASATQEQLDLLPELLKQFLSSPAVNERT DDDKTLALALWLP >Mature_252_residues SWRLVYASAVGTSHISADLPCQDACQMQVAWLNDQQPLLVMFLADGAGSVSQGGEGAMLAVNEAMAYMSQKVQGGELGLN DILATDIVLTVRQRLFAEAEAKELAVRDFACTFLGLISSANGTLIMQIGDGGVVVDFGHGLQLPLTPMVGEYANMTHFIT DEDAVSRLETFTSTERVHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASATQEQLDLLPELLKQFLSSPAVNERTD DDKTLALALWLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788387, Length=251, Percent_Identity=93.6254980079681, Blast_Score=489, Evalue=1e-140,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001932 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27367; Mature: 27235
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWRLVYASAVGTSHISADLPCQDACQMQVAWLNDQQPLLVMFLADGAGSVSQGGEGAML CCEEEEEEECCCCCCCCCCCCHHHHHCEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEE AVNEAMAYMSQKVQGGELGLNDILATDIVLTVRQRLFAEAEAKELAVRDFACTFLGLISS EHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ANGTLIMQIGDGGVVVDFGHGLQLPLTPMVGEYANMTHFITDEDAVSRLETFTSTERVHK CCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH VAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASATQEQLDLLPELLKQFLSSPAVNERT HHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DDDKTLALALWLP CCCCEEEEEEECC >Mature Secondary Structure SWRLVYASAVGTSHISADLPCQDACQMQVAWLNDQQPLLVMFLADGAGSVSQGGEGAML CEEEEEEECCCCCCCCCCCCHHHHHCEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEE AVNEAMAYMSQKVQGGELGLNDILATDIVLTVRQRLFAEAEAKELAVRDFACTFLGLISS EHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ANGTLIMQIGDGGVVVDFGHGLQLPLTPMVGEYANMTHFITDEDAVSRLETFTSTERVHK CCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH VAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASATQEQLDLLPELLKQFLSSPAVNERT HHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DDDKTLALALWLP CCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]