| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30063481
Identifier: 30063481
GI number: 30063481
Start: 2091678
End: 2092277
Strand: Reverse
Name: 30063481
Synonym: S2215
Alternate gene names: NA
Gene position: 2092277-2091678 (Counterclockwise)
Preceding gene: 30063482
Following gene: 30063480
Centisome position: 45.49
GC content: 34.0
Gene sequence:
>600_bases ATGTCTTTAAATATTTTGATAATTTACTTTCTGGGCATGGTCGGGCAATTTAATAAGATTGCTATCTTTTTAATTTTTAC GGTGTGTTGGGTTTTAAGCATTATTAAACGTCAGCAATTTAGATGGCTGGCAATAAATAATATTGAGTTCAGTACGCTGT TTGTTATTTTATTTCTTGTTTTGATTTTTGTGGTTACATTGTTATCGTCCCTGCGAGCTCCCGGTGATTGGGATGATACT ATGTATCACTTACCTTTGGCTCGTTCATTAGTTGAGCACCATGCAATTGTTGTTGAACAATATTTGCGTTTTCCTCTGTT CCCGCAAAATGCAGATCTTTTAATGGCTTTAGGTTTACAGTTAGGAGATGTAAGGTTAGCTCAGTTTTTAGCAAATATCT GTTTTTTTGTAATAGCCTGTGGACTTGTTGGCTGTTCATGGGAAATTACGAAAACTTATTATCCAGGCATTATTGCTACA ATCCTACTATTTACTATCAATCCACTTAAAGATCATCTTGGTTATGCATATATTGATTTAACGCTATCTTTGTTTTGCTG CAGCCAGTATTCTTATATATATTCGCTCAGAAAACAATAA
Upstream 100 bases:
>100_bases CATTTTTTGTCATTGGTAATATTGTATTGTCATCTTTTTTTAAGGAGGGGGTGGCAGGACTTAACAAATTTTCTTTATTT TTTATTGCCTATGCATAGGG
Downstream 100 bases:
>100_bases AACACAAAATGAATTAATTTTTTTATGTGGTTTTTTTATTGGAATTGCTTGTGGCGTAAAACTATTTGGTGCCATATATG GAGCCATCATATTTGTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF11X6
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSLNILIIYFLGMVGQFNKIAIFLIFTVCWVLSIIKRQQFRWLAINNIEFSTLFVILFLVLIFVVTLLSSLRAPGDWDDT MYHLPLARSLVEHHAIVVEQYLRFPLFPQNADLLMALGLQLGDVRLAQFLANICFFVIACGLVGCSWEITKTYYPGIIAT ILLFTINPLKDHLGYAYIDLTLSLFCCSQYSYIYSLRKQ
Sequences:
>Translated_199_residues MSLNILIIYFLGMVGQFNKIAIFLIFTVCWVLSIIKRQQFRWLAINNIEFSTLFVILFLVLIFVVTLLSSLRAPGDWDDT MYHLPLARSLVEHHAIVVEQYLRFPLFPQNADLLMALGLQLGDVRLAQFLANICFFVIACGLVGCSWEITKTYYPGIIAT ILLFTINPLKDHLGYAYIDLTLSLFCCSQYSYIYSLRKQ >Mature_198_residues SLNILIIYFLGMVGQFNKIAIFLIFTVCWVLSIIKRQQFRWLAINNIEFSTLFVILFLVLIFVVTLLSSLRAPGDWDDTM YHLPLARSLVEHHAIVVEQYLRFPLFPQNADLLMALGLQLGDVRLAQFLANICFFVIACGLVGCSWEITKTYYPGIIATI LLFTINPLKDHLGYAYIDLTLSLFCCSQYSYIYSLRKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2093_SHIFL (P37788)
Other databases:
- EMBL: X71970 - EMBL: AE005674 - EMBL: AE014073 - PIR: G36966 - RefSeq: NP_707925.1 - RefSeq: NP_837652.1 - EnsemblBacteria: EBESCT00000085235 - EnsemblBacteria: EBESCT00000090924 - GeneID: 1025863 - GeneID: 1078517 - GenomeReviews: AE005674_GR - GenomeReviews: AE014073_GR - KEGG: sfl:SF2093 - KEGG: sfx:S2215 - GeneTree: EBGT00050000014516 - HOGENOM: HBG684076 - OMA: FLANICF - ProtClustDB: CLSK521457 - BioCyc: SFLE198214:AAN43632.1-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22893; Mature: 22761
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNILIIYFLGMVGQFNKIAIFLIFTVCWVLSIIKRQQFRWLAINNIEFSTLFVILFLV CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHH LIFVVTLLSSLRAPGDWDDTMYHLPLARSLVEHHAIVVEQYLRFPLFPQNADLLMALGLQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCH LGDVRLAQFLANICFFVIACGLVGCSWEITKTYYPGIIATILLFTINPLKDHLGYAYIDL HHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCHHHHHHHHHHHCCHHHHHHCHHHHHH TLSLFCCSQYSYIYSLRKQ HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLNILIIYFLGMVGQFNKIAIFLIFTVCWVLSIIKRQQFRWLAINNIEFSTLFVILFLV CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHH LIFVVTLLSSLRAPGDWDDTMYHLPLARSLVEHHAIVVEQYLRFPLFPQNADLLMALGLQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCH LGDVRLAQFLANICFFVIACGLVGCSWEITKTYYPGIIATILLFTINPLKDHLGYAYIDL HHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCHHHHHHHHHHHCCHHHHHHCHHHHHH TLSLFCCSQYSYIYSLRKQ HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7507920; 12384590; 12704152