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The map label for this gene is wzzB

Identifier: 30063477

GI number: 30063477

Start: 2086662

End: 2087675

Strand: Reverse

Name: wzzB

Synonym: S2210

Alternate gene names: 30063477

Gene position: 2087675-2086662 (Counterclockwise)

Preceding gene: 30063478

Following gene: 30063468

Centisome position: 45.39

GC content: 45.66

Gene sequence:

>1014_bases
ATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAATAATAATGTTTCTGGGCAAAACCATGACCC
GGAACAGATTGATTTGATTGATTTACTAGTGCAGTTGTGGCGTGGCAAGATGACAATTATCATTTCCGTCATTGTGGCTA
TTGCCCTGGCTATTGGTTATTTGGCAGTAGCGAAGGAGAAATGGACGTCAACAGCAATTATCACTCAGCCCGACGTGGGG
CAAATTGCTGGCTATAACAATGCCATGAATGTTATCTATGGTCAGGCTGCACCGAAAGTATCGGATTTGCAGGAGACGTT
AATTGGTCGCTTCAGTTCTGCCTTCTCTGCATTAGCAGAAACGCTGGATAATCAGGAAGAGCCAGAAAAACTTACCATCG
AACCTTCTGTTAAGAACCAGCAATTACCATTGACTGTTTCTTATGTTGGGCAAACTGCAGAGGGCGCACAAATGAAGTTG
GCCCAATACATTCAGCAAGTTGATGATAAAGTGAATCAAGAGCTAGAAAAGGATCTCAAGGACAACATTGCTCTGGGACG
GAAAAACTTGCAGGACTCTTTAAGAACCCAGGAAGTGGTCGCGCAGGAGCAGAAAGATCTGCGTATCCGTCAGATTCAGG
AAGCGTTGCAGTATGCGAATCAGGCGCAGGTGACAAAGCCACAGGTTCAGCAGACTGAAGATGTGACGCAAGATACGTTG
TTCCTTCTAGGGAGCGAAGCGCTGGAGTCGATGATTAAGCATGAAGCGACTCGTCCGTTGGTGTTCTCACCAAACTACTA
TCAGACACGTCAAAACCTGTTGGATATTGAAAAATTAAAGTTTGATGATCTTGATATTCATGCTTACCGCTATGTGATGA
AACCGACGTTACCTATTCGTCGCGATAGTCCGAAAAAGGCAATCACCTTGATTCTGGCAGTGCTTCTGGGCGGCATGGTT
GGCGCGGGGATTGTGTTGGGGCGTAACGCTCTGCGTAATTACAACGCGAAGTAA

Upstream 100 bases:

>100_bases
ATCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACCTCCGCAATAATTCATTATTTTTATCACTTATCCTATAGCATTC
ACGGGGATTATCGCTAAACT

Downstream 100 bases:

>100_bases
TATTATTGTGCATTTAAGAGAAACGGGCAGGGTGGTGACACCATGCCCGTTTTTTTTGCCGGATGCGATGCTGGCGCATC
TTATCCGGCCTACGTGTGTT

Product: regulator of length of O-antigen component of lipopolysaccharide chains

Products: NA

Alternate protein names: Polysaccharide antigen chain regulator [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRTWKFPSVRVMMRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIALAIGYLAVAKEKWTSTAIITQPDVG
QIAGYNNAMNVIYGQAAPKVSDLQETLIGRFSSAFSALAETLDNQEEPEKLTIEPSVKNQQLPLTVSYVGQTAEGAQMKL
AQYIQQVDDKVNQELEKDLKDNIALGRKNLQDSLRTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQQTEDVTQDTL
FLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIEKLKFDDLDIHAYRYVMKPTLPIRRDSPKKAITLILAVLLGGMV
GAGIVLGRNALRNYNAK

Sequences:

>Translated_337_residues
MRTWKFPSVRVMMRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIALAIGYLAVAKEKWTSTAIITQPDVG
QIAGYNNAMNVIYGQAAPKVSDLQETLIGRFSSAFSALAETLDNQEEPEKLTIEPSVKNQQLPLTVSYVGQTAEGAQMKL
AQYIQQVDDKVNQELEKDLKDNIALGRKNLQDSLRTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQQTEDVTQDTL
FLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIEKLKFDDLDIHAYRYVMKPTLPIRRDSPKKAITLILAVLLGGMV
GAGIVLGRNALRNYNAK
>Mature_337_residues
MRTWKFPSVRVMMRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIALAIGYLAVAKEKWTSTAIITQPDVG
QIAGYNNAMNVIYGQAAPKVSDLQETLIGRFSSAFSALAETLDNQEEPEKLTIEPSVKNQQLPLTVSYVGQTAEGAQMKL
AQYIQQVDDKVNQELEKDLKDNIALGRKNLQDSLRTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQQTEDVTQDTL
FLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIEKLKFDDLDIHAYRYVMKPTLPIRRDSPKKAITLILAVLLGGMV
GAGIVLGRNALRNYNAK

Specific function: Confers a modal distribution of chain length on the O- antigen component of lipopolysaccharide (LPS). Gives rise to a reduced number of short chain molecules and increases in numbers of longer molecules [H]

COG id: COG3765

COG function: function code M; Chain length determinant protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the wzzB/cld/rol family [H]

Homologues:

Organism=Escherichia coli, GI87082029, Length=326, Percent_Identity=97.8527607361963, Blast_Score=621, Evalue=1e-179,
Organism=Escherichia coli, GI87082332, Length=338, Percent_Identity=24.8520710059172, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1786802, Length=343, Percent_Identity=27.9883381924198, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 37890; Mature: 37890

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTWKFPSVRVMMRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIALAIGY
CCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LAVAKEKWTSTAIITQPDVGQIAGYNNAMNVIYGQAAPKVSDLQETLIGRFSSAFSALAE
HHHHHHHHCCEEEEECCCCHHHCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
TLDNQEEPEKLTIEPSVKNQQLPLTVSYVGQTAEGAQMKLAQYIQQVDDKVNQELEKDLK
HHCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DNIALGRKNLQDSLRTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQQTEDVTQDTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
FLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIEKLKFDDLDIHAYRYVMKPTLPIR
HHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
RDSPKKAITLILAVLLGGMVGAGIVLGRNALRNYNAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRTWKFPSVRVMMRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIALAIGY
CCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LAVAKEKWTSTAIITQPDVGQIAGYNNAMNVIYGQAAPKVSDLQETLIGRFSSAFSALAE
HHHHHHHHCCEEEEECCCCHHHCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
TLDNQEEPEKLTIEPSVKNQQLPLTVSYVGQTAEGAQMKLAQYIQQVDDKVNQELEKDLK
HHCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DNIALGRKNLQDSLRTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQQTEDVTQDTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
FLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIEKLKFDDLDIHAYRYVMKPTLPIR
HHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
RDSPKKAITLILAVLLGGMVGAGIVLGRNALRNYNAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]