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The map label for this gene is insF1 [C]

Identifier: 30063452

GI number: 30063452

Start: 2063643

End: 2064161

Strand: Reverse

Name: insF1 [C]

Synonym: S2181

Alternate gene names: 30063452

Gene position: 2064161-2063643 (Counterclockwise)

Preceding gene: 30063453

Following gene: 30063449

Centisome position: 44.88

GC content: 53.18

Gene sequence:

>519_bases
GTGGCAGAACGACCTGACCAGCTGTGGGTGGCTGATTTTACTTATGTCAGCACATGGCGGGGCTTCGTCTATGTGGCGTT
CATCATTGATGTGTTTGCCGGATACATCGTGGGGTGGCGGGTCTCATCGTCCATGGAAACGACATTCGTGCTGGATGCAC
TGGAGCAGGCGTTATGGGCCCGTCGACCGTCCGGCACGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCC
TACACACAGCGGCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGA
GAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACAC
TCATGTGGGTGGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCACATCCCTCCGGCAGAAGCAGAAAAAGCT
TATTATGCTTCCATCGGAAACGATGATCTGGCAGCCTGA

Upstream 100 bases:

>100_bases
GGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACGACCATCAGCCGGAAAGCCGTTGCCGCAGGCG
ACCGCGTAAACCGTCAGTTC

Downstream 100 bases:

>100_bases
GTTCACAGATAAAACACTCTCCAGGAAACCCGGGGCGGTTCACACAGTATTTTCACCATTTTGCCACTGCGGCCCCGGAA
GACGAAGATATGCCCGGAGA

Product: IS629 orfA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MAERPDQLWVADFTYVSTWRGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLA
YTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLMWVDWYNNRRLLERLGHIPPAEAEKA
YYASIGNDDLAA

Sequences:

>Translated_172_residues
MAERPDQLWVADFTYVSTWRGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLA
YTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLMWVDWYNNRRLLERLGHIPPAEAEKA
YYASIGNDDLAA
>Mature_171_residues
AERPDQLWVADFTYVSTWRGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAY
TQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLMWVDWYNNRRLLERLGHIPPAEAEKAY
YASIGNDDLAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=134, Percent_Identity=57.4626865671642, Blast_Score=156, Evalue=1e-38,
Organism=Escherichia coli, GI1788405, Length=156, Percent_Identity=34.6153846153846, Blast_Score=100, Evalue=4e-23,
Organism=Escherichia coli, GI1787263, Length=156, Percent_Identity=34.6153846153846, Blast_Score=100, Evalue=4e-23,
Organism=Escherichia coli, GI1786753, Length=156, Percent_Identity=34.6153846153846, Blast_Score=100, Evalue=4e-23,
Organism=Escherichia coli, GI1786570, Length=156, Percent_Identity=34.6153846153846, Blast_Score=100, Evalue=4e-23,
Organism=Escherichia coli, GI1786490, Length=156, Percent_Identity=34.6153846153846, Blast_Score=100, Evalue=4e-23,
Organism=Escherichia coli, GI1789981, Length=162, Percent_Identity=30.2469135802469, Blast_Score=85, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 19434; Mature: 19303

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERPDQLWVADFTYVSTWRGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWA
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHH
RRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHR
CCCCCCEEECCCCCCEEHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCHHHHHHHHH
KSWKNRAEVELATLMWVDWYNNRRLLERLGHIPPAEAEKAYYASIGNDDLAA
HHCCCCCCEEEEEEEEEECCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure 
AERPDQLWVADFTYVSTWRGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWA
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHH
RRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHR
CCCCCCEEECCCCCCEEHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCHHHHHHHHH
KSWKNRAEVELATLMWVDWYNNRRLLERLGHIPPAEAEKAYYASIGNDDLAA
HHCCCCCCEEEEEEEEEECCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2159625; 2824781 [H]