| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30063430
Identifier: 30063430
GI number: 30063430
Start: 2040101
End: 2040436
Strand: Reverse
Name: 30063430
Synonym: S2144
Alternate gene names: NA
Gene position: 2040436-2040101 (Counterclockwise)
Preceding gene: 30063435
Following gene: 30063429
Centisome position: 44.36
GC content: 47.32
Gene sequence:
>336_bases ATGGCGCGAGTAGAGGGCGAGTTATTCAAAATTGCACGGGCATCGCTGGAAGCAGAGCCGATAGCGTGGCGATATCGCTA CGTGAAAAAAGGTGTTATGGACTCTCAGGGGGAGTTGTGGGTTGGTGACTGGAAATATGTACCGAAAAAAGAGGATTGTA ACGACAGGCCGAACTATGAAATTCAGGCCTTATTCACTGCCCCACCAGTCCCGGTTACATCAGAAGAACTGGTTAAAGCT GTGCACTTTTATGAACAATTAAAACGCGAAAATCCACCAGCATCCGGCAACCAGATTAATGGGTTAACTATGTCGGTTAA ACGACCAGCCAACTGA
Upstream 100 bases:
>100_bases TACCAGGGCGGTAATGAAAATGACTGAATTAACAAAAGAACAATTAATCGAAGAAGCCAAATTAAAAATAGCGATTACGA AATGCCACCCCAATTCAGGG
Downstream 100 bases:
>100_bases AAAAGCGGAAACCTGATTATAGGTTGCCAGATAAGGCAATAAGCTACCTGGCGCGGAACGGACTGATAAGTATGGGGAAT GTTTTACGATGAGTATTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MARVEGELFKIARASLEAEPIAWRYRYVKKGVMDSQGELWVGDWKYVPKKEDCNDRPNYEIQALFTAPPVPVTSEELVKA VHFYEQLKRENPPASGNQINGLTMSVKRPAN
Sequences:
>Translated_111_residues MARVEGELFKIARASLEAEPIAWRYRYVKKGVMDSQGELWVGDWKYVPKKEDCNDRPNYEIQALFTAPPVPVTSEELVKA VHFYEQLKRENPPASGNQINGLTMSVKRPAN >Mature_110_residues ARVEGELFKIARASLEAEPIAWRYRYVKKGVMDSQGELWVGDWKYVPKKEDCNDRPNYEIQALFTAPPVPVTSEELVKAV HFYEQLKRENPPASGNQINGLTMSVKRPAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12695; Mature: 12563
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVEGELFKIARASLEAEPIAWRYRYVKKGVMDSQGELWVGDWKYVPKKEDCNDRPNYE CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEECCCEECCCCCCCCCCCCEE IQALFTAPPVPVTSEELVKAVHFYEQLKRENPPASGNQINGLTMSVKRPAN EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure ARVEGELFKIARASLEAEPIAWRYRYVKKGVMDSQGELWVGDWKYVPKKEDCNDRPNYE CCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEECCCEECCCCCCCCCCCCEE IQALFTAPPVPVTSEELVKAVHFYEQLKRENPPASGNQINGLTMSVKRPAN EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA