Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is 30063331
Identifier: 30063331
GI number: 30063331
Start: 1939569
End: 1939964
Strand: Direct
Name: 30063331
Synonym: S2019
Alternate gene names: NA
Gene position: 1939569-1939964 (Clockwise)
Preceding gene: 30063329
Following gene: 30063332
Centisome position: 42.17
GC content: 45.2
Gene sequence:
>396_bases ATGAATGTGGTCTCAAACACCCAACTGCTTGAACAGCGTATCGCCGATTTTTTTACGCTTAGTGATGAGCATAAGAAAGC CAGAGTATTACTTGATACTCTGGCCTGTTCCTGTCCGGCCAGGATTTTTGGCGGGATGGTGCGTGACTTAGGCTTGTATG GCGTCGATGGATTCTCTTCAGACCTTGATATCGTCATCGGTCGCTCCCGTGAGGAACTCTTCCAGACATTGGCTGAACTG CCCGTCAAACAACTGCGTTTTAATAAGTTTGGTGGGATCCGTTTTCGTTATCACGACTTCGAATTTGATATCTGGAACCT CAATGAGACATGGGCATTCCAGGAAAAACTTATATTTTGTGAGGATGAATCAAGTCTGTTAAATGAGGTAGCCTGA
Upstream 100 bases:
>100_bases GTTCAGGTGGCCAAATTCAGTGTGCCACTTCATACCGACGCAATCTCAGGCATGACGGATAGTTATTTAATGCGCCTTCA CGATGAGCTAAAATCACTGT
Downstream 100 bases:
>100_bases GTTTAACGGACACTCCTTCCTGAAATAGAATGGCATCAGAAGGAGCTAATAATGAGCAGAAAAACCCAACGTTACTCTAA ATAGTTCAAAGCCGAAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MNVVSNTQLLEQRIADFFTLSDEHKKARVLLDTLACSCPARIFGGMVRDLGLYGVDGFSSDLDIVIGRSREELFQTLAEL PVKQLRFNKFGGIRFRYHDFEFDIWNLNETWAFQEKLIFCEDESSLLNEVA
Sequences:
>Translated_131_residues MNVVSNTQLLEQRIADFFTLSDEHKKARVLLDTLACSCPARIFGGMVRDLGLYGVDGFSSDLDIVIGRSREELFQTLAEL PVKQLRFNKFGGIRFRYHDFEFDIWNLNETWAFQEKLIFCEDESSLLNEVA >Mature_131_residues MNVVSNTQLLEQRIADFFTLSDEHKKARVLLDTLACSCPARIFGGMVRDLGLYGVDGFSSDLDIVIGRSREELFQTLAEL PVKQLRFNKFGGIRFRYHDFEFDIWNLNETWAFQEKLIFCEDESSLLNEVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15131; Mature: 15131
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVVSNTQLLEQRIADFFTLSDEHKKARVLLDTLACSCPARIFGGMVRDLGLYGVDGFSS CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC DLDIVIGRSREELFQTLAELPVKQLRFNKFGGIRFRYHDFEFDIWNLNETWAFQEKLIFC CCEEEEECCHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCEEEEECCCCCHHHHHEEEEE EDESSLLNEVA CCHHHHHHHCC >Mature Secondary Structure MNVVSNTQLLEQRIADFFTLSDEHKKARVLLDTLACSCPARIFGGMVRDLGLYGVDGFSS CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC DLDIVIGRSREELFQTLAELPVKQLRFNKFGGIRFRYHDFEFDIWNLNETWAFQEKLIFC CCEEEEECCHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCEEEEECCCCCHHHHHEEEEE EDESSLLNEVA CCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA