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The map label for this gene is yddK [H]

Identifier: 30063232

GI number: 30063232

Start: 1830853

End: 1831842

Strand: Direct

Name: yddK [H]

Synonym: S1888

Alternate gene names: 30063232

Gene position: 1830853-1831842 (Clockwise)

Preceding gene: 30063231

Following gene: 30063233

Centisome position: 39.81

GC content: 32.22

Gene sequence:

>990_bases
ATGATCACTGACCTTATATTACACAATCATCCCAGGATGAAAACAATCACTTTAAACGACAACCATATTGCACATTTAAA
CGCCAAAAACACTACAAAACTGGAATATTTAAACTTAAGCAATAACAATTTACTGCCAACCAATGACATTGATCAACTAA
TATCATCAAAACATCTTTGGCATGTATTAGTTAACGGCATCAACAATGATCCACTTGCACAAATGCAGTACTGGACTGCA
GTAAGAAATATAATTGATGACACTAATGAAGTGACCATTGATTTATCAGGACTTAATTTAACCACTCAACCACCAGGGCT
GCAAAACTTCACCTCTATCAATCTTGATAATAACCAACTCACACATTTTGATGCAACCAACTACGATAGACTCGTAAAGC
TAAGTCTGAATAGTAATGCTCTTGAGTCAATAAATTTTCCTCAAGGCAGAAATGTAAGTATTACACATATATCTATGAAT
AATAATGCTCTCAGAAATATTGATATAGATAGGCTTTCATCAGTTACTTATTTTAGTGCGGCACATAATCAACTAGAGTT
TGTGCAATTAGAATCTTGCGAATGGCTGCAATACCTGAATCTCAGCCATAATCAATTAACTGATATTGTTGCAGGTAATA
AAAATGAACTCTTACTGCTGGATCTATCCCATAATAAACTAACAAGTTTACACAATGTCTTATTTCCCAACTTGAATACG
TTACTTATTAACAACAATTTGCTTTCTGAAATTAAAATATTCTATAGCAACTTCCGCAATGTTCAGACATTAAACGCTGC
TAACAACCAGTTGAAATATATAAATCTTGATTTCCTGACTTATCTTCCATCTATCAAAAGTTTAAGACTGGACAATAATA
AAATAACCCACATTGATACTAATAATACATCCGATATTGGAACTTTATTCCCCATAATAAAACAGAGCAAAAACTTAAAT
TTTTTAAATGTTTCTGGGAAGAACAATTGA

Upstream 100 bases:

>100_bases
TAGTTATAAACTGAAATTTCTTAATCTTGATTATAACAAGCTAGCATCGCTGGATGTCTCCCGGCAAGAATCTCTGATTG
AGTTAAGTGCCCATCACAAT

Downstream 100 bases:

>100_bases
CCTACTATGCAGCTCATGTTATTTAATTTGTTTTCCCCAGCACTTAAGCTTAATACTGGCCTGGCAATTCTTTCGCCTGG
TGCATTTGAAGTTCACTCTG

Product: putative glycoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYWTA
VRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQLTHFDATNYDRLVKLSLNSNALESINFPQGRNVSITHISMN
NNALRNIDIDRLSSVTYFSAAHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNVLFPNLNT
LLINNNLLSEIKIFYSNFRNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDTNNTSDIGTLFPIIKQSKNLN
FLNVSGKNN

Sequences:

>Translated_329_residues
MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYWTA
VRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQLTHFDATNYDRLVKLSLNSNALESINFPQGRNVSITHISMN
NNALRNIDIDRLSSVTYFSAAHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNVLFPNLNT
LLINNNLLSEIKIFYSNFRNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDTNNTSDIGTLFPIIKQSKNLN
FLNVSGKNN
>Mature_329_residues
MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYWTA
VRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQLTHFDATNYDRLVKLSLNSNALESINFPQGRNVSITHISMN
NNALRNIDIDRLSSVTYFSAAHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNVLFPNLNT
LLINNNLLSEIKIFYSNFRNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDTNNTSDIGTLFPIIKQSKNLN
FLNVSGKNN

Specific function: Unknown

COG id: COG4886

COG function: function code S; Leucine-rich repeat (LRR) protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 9 LRR (leucine-rich) repeats [H]

Homologues:

Organism=Drosophila melanogaster, GI281362653, Length=303, Percent_Identity=24.0924092409241, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281362657, Length=303, Percent_Identity=24.0924092409241, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281362655, Length=303, Percent_Identity=24.0924092409241, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24650330, Length=303, Percent_Identity=24.0924092409241, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281362651, Length=303, Percent_Identity=24.0924092409241, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24650334, Length=303, Percent_Identity=24.0924092409241, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24650332, Length=303, Percent_Identity=24.0924092409241, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI62472958, Length=303, Percent_Identity=24.0924092409241, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116007092, Length=303, Percent_Identity=24.0924092409241, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001611 [H]

Pfam domain/function: PF00560 LRR_1 [H]

EC number: NA

Molecular weight: Translated: 37459; Mature: 37459

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLW
CCEEEEECCCCCEEEEEECCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCEE
HVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQL
EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCEEEECCCCEE
THFDATNYDRLVKLSLNSNALESINFPQGRNVSITHISMNNNALRNIDIDRLSSVTYFSA
EEECCCCCCEEEEEEECCCCHHHCCCCCCCCEEEEEEEECCCCEEECCHHHHCCEEEEEC
AHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNVLFPNLNT
CCCCEEEEEECCCCHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCE
LLINNNLLSEIKIFYSNFRNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDT
EEEECCHHHHHHHHHHHCCCEEEECCCCCEEEEEEEHHHHHCCCHHEEEECCCEEEEEEC
NNTSDIGTLFPIIKQSKNLNFLNVSGKNN
CCCCCHHHHHHHHHCCCCCCEEEECCCCC
>Mature Secondary Structure
MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLW
CCEEEEECCCCCEEEEEECCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCEE
HVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQL
EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCEEEECCCCEE
THFDATNYDRLVKLSLNSNALESINFPQGRNVSITHISMNNNALRNIDIDRLSSVTYFSA
EEECCCCCCEEEEEEECCCCHHHCCCCCCCCEEEEEEEECCCCEEECCHHHHCCEEEEEC
AHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNVLFPNLNT
CCCCEEEEEECCCCHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCE
LLINNNLLSEIKIFYSNFRNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDT
EEEECCHHHHHHHHHHHCCCEEEECCCCCEEEEEEEHHHHHCCCHHEEEECCCEEEEEEC
NNTSDIGTLFPIIKQSKNLNFLNVSGKNN
CCCCCHHHHHHHHHCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]