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The map label for this gene is ydgA

Identifier: 30063129

GI number: 30063129

Start: 1705870

End: 1707345

Strand: Direct

Name: ydgA

Synonym: S1768

Alternate gene names: 30063129

Gene position: 1705870-1707345 (Clockwise)

Preceding gene: 30063128

Following gene: 30063136

Centisome position: 37.09

GC content: 48.71

Gene sequence:

>1476_bases
ATGAATAAATCGCTGGTAGCGGTAGGCGTCATTGTTGCGCTAGGCGTAGTCTGGACAGGCGGCGCATGGTATACAGGCAA
GAAGATTGAAACCCATCTCGAAGACATGGTCGCGCAGGCGAACGCGCAACTCAAACTGACAGCTCCTGAATCCAACCTGG
AAGTGAGTTATCAAAACTATCATCGCGGCGTATTCAGCAGCCAGTTGCAACTGTTGGTGAAACCCATTGCCGGGAAAGAA
AATCCGTGGATTAAAAGCGGTCAGAGCGTCATCTTCAACGAATCGGTTGATCATGGTCCCTTCCCGCTTGCCCAGCTTAA
AAAACTGAACCTGATCCCGTCGATGGCATCAATTCAAACCACGCTGGTTAATAACGAAGTAAGCAAACCACTGTTTGATA
TGGCAAAAGGTGAAACGCCTTTTGAGATTAACTCGCGCATTGGTTACAGCGGTGATTCCAGTTCCGATATTTCGCTCAAT
CCACTGAATTACGAGCAAAAGGATGAAAAAGTCGCCTTTAGCGGCGGCGAGTTCCAGTTAAATGCTGACAGAGACGGCAA
AGCCATCTCCCTTTCCGGAGAGGCGCAAAGTGGTCGGATAGACGCAGTTAACGAATACAACCAGAAAGTGCAGTTGACCT
TTAATAATCTGAAAACCGACGGTTCCAGCACGCTGGGAAGTTTTGGTGAGCGCGTAGGAAACCAAAAACTGTCACTGGAA
AAAATGACCATTTCAGTGGAAGGCAAAGAACTGGCACTGCTGGAAGGCATGGAGATCAGCGGTAAATCGGATCTGGTCAA
TGACGGTAAAACGATCAATAGCCAACTGGATTACTCGCTAAACAGCCTGAAGGTACAGAATCAGGATCTGGGCAGCGGCA
AGCTGACTTTAAAAGTCGGCCAGATTGATGGTGAAGCCTGGCATCAGTTTAGCCAGCAATATAACGCGCAAACTCAGGCG
CTGCTGGCACAGCCAGAAATTGCCAACAATCCCGAACTTTATCAGGAGAAAGTGACGGAAGCCTTCTTTAGCGCCCTGCC
GCTGATGTTGAAAGGCGATCCGGTGATTACTATCGCGCCGCTAAGCTGGAAAAACAGTCAGGGTGAAAGTGCGCTGAATC
TGTCGCTGTTCCTGAAAGATCCGGCAACGACTAAAGAAGCGCCGCAAACGCTGGCGCAGGAAGTAGATCGTTCGGTTAAA
TCTCTGGATGCGAAACTGACCATTCCGGTGGATATGGCAACTGAGTTGATGACTCAGGTAGCGAAGCTGGAAGGTTATCA
GGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAATGGGGCAGATGTTCCGTCTGACCACCT
TGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATGTCGTTAGAA
GATTTTGTTGGCATGTTTGCTGATGCCAGCTCTTAA

Upstream 100 bases:

>100_bases
GAGCTTACTGAAAAAATTAACATCTCTTGCTAAGCTTATTAAAGGCTTATAACACCTTCAGGCGGCCAGTCCGCCTGATT
TCATTTTATGGATAATCATT

Downstream 100 bases:

>100_bases
CGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCT
GAAAACAAACCAGAGATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKE
NPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLN
PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLGSFGERVGNQKLSLE
KMTISVEGKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQA
LLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVK
SLDAKLTIPVDMATELMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYANGQITLNGQKMSLE
DFVGMFADASS

Sequences:

>Translated_491_residues
MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKE
NPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLN
PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLGSFGERVGNQKLSLE
KMTISVEGKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQA
LLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVK
SLDAKLTIPVDMATELMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYANGQITLNGQKMSLE
DFVGMFADASS
>Mature_491_residues
MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKE
NPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLN
PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLGSFGERVGNQKLSLE
KMTISVEGKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQA
LLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVK
SLDAKLTIPVDMATELMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYANGQITLNGQKMSLE
DFVGMFADASS

Specific function: Unknown

COG id: COG5339

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side. Note=Has been isolated in association with the inner membrane, suggesting it may be tethered to the membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yihF and H.influenzae HI_1236 [H]

Homologues:

Organism=Escherichia coli, GI1787900, Length=487, Percent_Identity=99.3839835728953, Blast_Score=982, Evalue=0.0,
Organism=Escherichia coli, GI87082339, Length=479, Percent_Identity=34.2379958246347, Blast_Score=268, Evalue=6e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010352 [H]

Pfam domain/function: PF06097 DUF945 [H]

EC number: NA

Molecular weight: Translated: 53460; Mature: 53460

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNY
CCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCEEEEECCCCCCEEEHHHH
HRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQT
HCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHH
TLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLNPLNYEQKDEKVAFSGGEFQL
HHHCCHHCCCHHHHHCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCEEEE
NADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLGSFGERVGNQKLSLE
ECCCCCCEEEECCCCCCCCCCCHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
KMTISVEGKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVG
EEEEEECCCEEEEEECCCCCCCCCCCCCCCEECCHHCCCCCCEEEECCCCCCCEEEEEEE
QIDGEAWHQFSQQYNAQTQALLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAP
CCCCHHHHHHHHHHCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEE
LSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVKSLDAKLTIPVDMATELMTQV
CCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
AKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYANGQITLNGQKMSLE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCCEEEECCCEECHH
DFVGMFADASS
HHHHHHHCCCC
>Mature Secondary Structure
MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNY
CCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCEEEEECCCCCCEEEHHHH
HRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQT
HCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHH
TLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLNPLNYEQKDEKVAFSGGEFQL
HHHCCHHCCCHHHHHCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCEEEE
NADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLGSFGERVGNQKLSLE
ECCCCCCEEEECCCCCCCCCCCHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
KMTISVEGKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVG
EEEEEECCCEEEEEECCCCCCCCCCCCCCCEECCHHCCCCCCEEEECCCCCCCEEEEEEE
QIDGEAWHQFSQQYNAQTQALLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAP
CCCCHHHHHHHHHHCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEE
LSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVKSLDAKLTIPVDMATELMTQV
CCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
AKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYANGQITLNGQKMSLE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCCEEEECCCEECHH
DFVGMFADASS
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]