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The map label for this gene is dmsB [H]

Identifier: 30063104

GI number: 30063104

Start: 1677248

End: 1677865

Strand: Direct

Name: dmsB [H]

Synonym: S1742

Alternate gene names: 30063104

Gene position: 1677248-1677865 (Clockwise)

Preceding gene: 30063095

Following gene: 30063105

Centisome position: 36.47

GC content: 52.75

Gene sequence:

>618_bases
ATGACCACACAATATGGATTTTTTATCGATTCCAGCCGCTGTACTGGCTGTAAAACCTGCGAACTGGCGTGCAAAGATTT
TAAAGATCTTGGCCCGGAAGTCAGTTTCCGCCGTATTTATGAATATGCTGGCGGCGACTGGCAGGAAGATAATGGCATCT
GGCACCAGAACGTGTTCGCTTATTATCTCTCCATCTCCTGTAACCATTGCGATGACCCCGCATGTACAAAAGTCTGCCCC
AGCGGCGCAATGCATAAGCGTGAAGATGGCTTTGTGGTGGTTGATGAAGATGTTTGTATCGGCTGCCGCTACTGCCACAT
GGCTTGTCCGTACGGCGCACCACAGTACAATGCTGAAAAAGGGCACATGACGAAGTGCGATGGTTGTTATTCGCGCGTCG
CCGAGGGGAAACAACCCATATGCGTCGAATCCTGCCCGCTGCGTGCACTTGAGTTCGGTCCAATTGAAGAGCTGCGCCAG
AAGCACGGCACTCTGGCTGCCGTCGCGCCACTGCCGCGCGCGCATTTCACAAAACCCAATATCGTTATCAAACCTAACGC
CAACAGCCGCCCGACCGGCGATACCACTGGTTATCTGGCTAATCCGGAGGAAGTGTAA

Upstream 100 bases:

>100_bases
AGTATCAATATTCTGACCTCTCACCGCCCTTCACCGCTGGCAAAGGGAAACCCGTCGCACAGCAATCTTGTCCAGATCGA
AAAGGTTTAAGGAGTAGCCC

Downstream 100 bases:

>100_bases
AATGGGAAATGGATGGCATGAATGGCCACTGGTTATCTTTACCGTATTGGGTCAATGCGTAGTAGGCGCGCTGATTGTTA
GCGGAATTGGCTGGTTCGCC

Product: putative oxidoreductase, Fe-S subunit

Products: NA

Alternate protein names: DMSO reductase iron-sulfur subunit [H]

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGIWHQNVFAYYLSISCNHCDDPACTKVCP
SGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAEKGHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQ
KHGTLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPEEV

Sequences:

>Translated_205_residues
MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGIWHQNVFAYYLSISCNHCDDPACTKVCP
SGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAEKGHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQ
KHGTLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPEEV
>Mature_204_residues
TTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGIWHQNVFAYYLSISCNHCDDPACTKVCPS
GAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAEKGHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQK
HGTLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPEEV

Specific function: Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787872, Length=205, Percent_Identity=99.5121951219512, Blast_Score=431, Evalue=1e-122,
Organism=Escherichia coli, GI1787122, Length=205, Percent_Identity=93.6585365853659, Blast_Score=410, Evalue=1e-116,
Organism=Escherichia coli, GI1787749, Length=166, Percent_Identity=34.3373493975904, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789370, Length=198, Percent_Identity=33.8383838383838, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI226510944, Length=152, Percent_Identity=38.8157894736842, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1790326, Length=167, Percent_Identity=32.3353293413174, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI2367345, Length=188, Percent_Identity=33.5106382978723, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787478, Length=99, Percent_Identity=43.4343434343434, Blast_Score=89, Evalue=1e-19,
Organism=Escherichia coli, GI2367245, Length=165, Percent_Identity=32.7272727272727, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787740, Length=101, Percent_Identity=41.5841584158416, Blast_Score=88, Evalue=3e-19,
Organism=Escherichia coli, GI1789067, Length=166, Percent_Identity=33.1325301204819, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87082179, Length=162, Percent_Identity=30.8641975308642, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1788811, Length=153, Percent_Identity=30.718954248366, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787963, Length=162, Percent_Identity=29.0123456790123, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082180, Length=161, Percent_Identity=29.1925465838509, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014297 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 22766; Mature: 22635

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
7.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGIWHQNVFA
CCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHCEEE
YYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAEK
EEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEECCCEEECCHHHEEECCCCCCCCCCCC
GHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQKHGTLAAVAPLPRAHFTKPN
CCCCCHHHHHHHHHCCCCCEEECCCCCCEECCCCHHHHHHHCCCEEEECCCCCCCCCCCC
IVIKPNANSRPTGDTTGYLANPEEV
EEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGIWHQNVFA
CCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHCEEE
YYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAEK
EEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEECCCEEECCHHHEEECCCCCCCCCCCC
GHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQKHGTLAAVAPLPRAHFTKPN
CCCCCHHHHHHHHHCCCCCEEECCCCCCEECCCCHHHHHHHCCCEEEECCCCCCCCCCCC
IVIKPNANSRPTGDTTGYLANPEEV
EEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 4Fe-4S clusters [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 2174699; 1653010 [H]