Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is insB1 [H]
Identifier: 30063038
GI number: 30063038
Start: 1607022
End: 1607315
Strand: Direct
Name: insB1 [H]
Synonym: S1653
Alternate gene names: 30063038
Gene position: 1607022-1607315 (Clockwise)
Preceding gene: 30063037
Following gene: 30063042
Centisome position: 34.94
GC content: 51.7
Gene sequence:
>294_bases GTGGCGCACGTCTTCGGTGAACGCACTCTGGCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGT ATGGATGACGGATGGCTGTCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGC GCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGTACGGAAGTCACTGTCGTTCTCAAAATCGGTG GAGCTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAA
Upstream 100 bases:
>100_bases GATTGTCTGCGCTGAAATGGACGAACATTGGGGCTACGTCGGTGCTAAATCACGTCAGCGCTGGCTGTTTTACGCGTATG ACAGGATACGGAGGACGGTT
Downstream 100 bases:
>100_bases GTTGGAGTCATTACCGGCGTAAAGTCTGAGAAAGCAACGTTTGTTTTGGTTGCTTTCAGCTTTACATCATCTGCCGCATG AGCAGCAAATGCAGCCATAC
Product: IS1
Products: NA
Alternate protein names: IS1a [H]
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MAHVFGERTLATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLVRKSLSFSKSV ELHDKVIGHYLNIKHYQ
Sequences:
>Translated_97_residues MAHVFGERTLATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLVRKSLSFSKSV ELHDKVIGHYLNIKHYQ >Mature_96_residues AHVFGERTLATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLVRKSLSFSKSVE LHDKVIGHYLNIKHYQ
Specific function: Absolutely required for transposition of IS1 [H]
COG id: COG1662
COG function: function code L; Transposase and inactivated derivatives, IS1 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 27 family [H]
Homologues:
Organism=Escherichia coli, GI1789853, Length=97, Percent_Identity=90.7216494845361, Blast_Score=182, Evalue=3e-48, Organism=Escherichia coli, GI1788203, Length=97, Percent_Identity=90.7216494845361, Blast_Score=182, Evalue=3e-48, Organism=Escherichia coli, GI1786203, Length=97, Percent_Identity=90.7216494845361, Blast_Score=182, Evalue=3e-48, Organism=Escherichia coli, GI1787223, Length=97, Percent_Identity=89.6907216494845, Blast_Score=181, Evalue=9e-48, Organism=Escherichia coli, GI1786470, Length=97, Percent_Identity=89.6907216494845, Blast_Score=181, Evalue=1e-47, Organism=Escherichia coli, GI1786459, Length=97, Percent_Identity=89.6907216494845, Blast_Score=181, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005063 [H]
Pfam domain/function: PF03400 Transposase_27 [H]
EC number: NA
Molecular weight: Translated: 11426; Mature: 11294
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHVFGERTLATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC NLRQHLARLVRKSLSFSKSVELHDKVIGHYLNIKHYQ CHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AHVFGERTLATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC NLRQHLARLVRKSLSFSKSVELHDKVIGHYLNIKHYQ CHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 375010; 1849492; 1630901; 9278503 [H]