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The map label for this gene is ydiY [H]

Identifier: 30063011

GI number: 30063011

Start: 1579126

End: 1579851

Strand: Direct

Name: ydiY [H]

Synonym: S1625

Alternate gene names: 30063011

Gene position: 1579126-1579851 (Clockwise)

Preceding gene: 30063007

Following gene: 30063014

Centisome position: 34.33

GC content: 49.86

Gene sequence:

>726_bases
ATGTTGGCGGGGGGCATGTTTGCGTCACTGAATGCAGCTGCCGATGATTCCGTTTTTACTGTCATGGACGATCCTGCCAG
CGCTAAAAAACCTTTCGAAGGTAATCTGAACGCAGGATATCTTGCACAATCAGGCAATACGAAAAGCTCCTCACTTACGG
CTGACACCACCATGACCTGGTATGGACAAACCACTGCCTGGTCGCTGTGGGGGAACGCCAGTAATACTTCTTCTAATGAT
GAGCGTTCTTCAGAAAAATATGCGGCGGGCGGGCGTAGCCGCTTTAATTTAACTGATTATGACTATTTATTTGGTCAGGC
AAGCTGGCTGACAGACCGTTATAACGGCTATCGAGAGCGCGATGTGTTGACCGCGGGTTATGGTCGTCAGTTTTTGAATG
GCCCGGTACACAGTTTCCGCTTTGAATTCGGTCCAGGTGTGCGTTACGACAAATATACCGACAATGCCAGTGAAACCCAG
CCGCTGGGCTATGCCTCCGGGGCTTATGCATGGCAGTTGACTGACAACGCTAAATTTACGCAGGGTGTTTCGGTCTTTGG
CGCGGAAGACACAACGCTGAACTCCGAAAGCGCATTAAATGTTGCTATTAATGAACATTTTGGACTGAAGGTGGCTTACA
ACGTCACATGGAACTCTGAACCTCCAGAGTCTGCACCGGAACATACCGACCGTCGGACAACCTTATCGCTGGGCTACAGC
ATGTAA

Upstream 100 bases:

>100_bases
CTTTGATCCTTAAGAAAGTTTCCGGGACCGCGATGGTCTCTTTTTTTGTTGTACGGACTCTTGATAAATGAAGCTTTTGA
AGACAGTTCCTGCCATCGTT

Downstream 100 bases:

>100_bases
AATTATCTGCCGGACCGTGTTATGCGGTCTGGCTGTCTTCGTTTGTCACTGCTCAGCCCCAAATCATTGCTGCCCAACGT
AGCAACAACATAGCGCCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSLWGNASNTSSND
ERSSEKYAAGGRSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQ
PLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHTDRRTTLSLGYS
M

Sequences:

>Translated_241_residues
MLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSLWGNASNTSSND
ERSSEKYAAGGRSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQ
PLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHTDRRTTLSLGYS
M
>Mature_241_residues
MLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSLWGNASNTSSND
ERSSEKYAAGGRSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQ
PLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHTDRRTTLSLGYS
M

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=241, Percent_Identity=99.5850622406639, Blast_Score=492, Evalue=1e-141,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 26404; Mature: 26404

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKSSSLTADTTMTW
CCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCEEEE
YGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASWLTDRYNGYRER
ECCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCC
DVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAYAWQLTDNAKFT
CEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
QGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHTDRRTTLSLGYS
CCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCC
M
C
>Mature Secondary Structure
MLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKSSSLTADTTMTW
CCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCEEEE
YGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASWLTDRYNGYRER
ECCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCC
DVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAYAWQLTDNAKFT
CEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
QGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHTDRRTTLSLGYS
CCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCC
M
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]