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The map label for this gene is ydjC

Identifier: 30063000

GI number: 30063000

Start: 1567467

End: 1568225

Strand: Direct

Name: ydjC

Synonym: S1612

Alternate gene names: 30063000

Gene position: 1567467-1568225 (Clockwise)

Preceding gene: 30062999

Following gene: 30063002

Centisome position: 34.08

GC content: 50.33

Gene sequence:

>759_bases
ATGGAACGCTTACTGATTGTTAATGCCGATGATTTTGGCTTAAGCAAAGGTCAGAACTACGGCATTATCGAGGCCTGTCG
CAATGGGATTGTCACATCGACGACGGCGCTGGTGAATGGGCAGGCTATTGACCATGCGGTGCAGTTGAGTCGTGATGAAC
CGAGTCTGGCCATAGGGATGCACTTTGTCCTTACTATGGGCAAGCCACTGACAGCTATGCCGGGGTTAACCCGCGATGGT
GTGCTGGGAAAATGGATCTGGCAGTTGGCAGAAGAAGATGCTTTACCGCTGGAAGAAATTACTCAGGAGCTTGCCAGTCA
GTATTTGCGTTTCATTGAGCTATTTGGACGCAAACCTACGCATCTTGATAGCCATCATCATGTGCATATGTTCCCGCAGA
TTTTCCCGATTGTTGCCAGGTTTGCGGCTGAAGAGGGGATTGCGTTGCGCATCGACCGTCAGCCGCTATCTAACGCTGGT
GATTTACCGGCTAATCTGCGCAGTTCGCAGGGATTCAGTAGCGCGTTTTATGGTGAAGAGATTAGCGAGGCACTGTTCCT
GCAAGTGCTGGATGACGCAAGCCATCGGGGTGATCCTTCGCTGGAGGTGATGTGTCATCCGGCGTTTATCGATAATACTA
TCCGTCAGAGTGCTTACTGTTTCCCACGGTTAACGGAGCTGGAAGTGCTGACATCAGCGTCGTTGAAATATGCAATTGCT
GAGCGTGGTTATCGGTTGGGTAGTTATCTTGATGTGTAA

Upstream 100 bases:

>100_bases
GCTGCTGGCACGCGAGATGATTCTGGCGCACGAGAAATGGCTGCCAAATTTTGCCGACTGCATCGCAGAGCTTAAAAAAG
CACATTAACCGAGGCTGATT

Downstream 100 bases:

>100_bases
GTAAGGTGGTAAGGTCACTCCCCAGGGGACGTGACCTTATCCATATTTACGCCGGAATTTTGTCAATCTTAGGAATGCGT
GACCACACGCGGTGTTCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRDEPSLAIGMHFVLTMGKPLTAMPGLTRDG
VLGKWIWQLAEEDALPLEEITQELASQYLRFIELFGRKPTHLDSHHHVHMFPQIFPIVARFAAEEGIALRIDRQPLSNAG
DLPANLRSSQGFSSAFYGEEISEALFLQVLDDASHRGDPSLEVMCHPAFIDNTIRQSAYCFPRLTELEVLTSASLKYAIA
ERGYRLGSYLDV

Sequences:

>Translated_252_residues
MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRDEPSLAIGMHFVLTMGKPLTAMPGLTRDG
VLGKWIWQLAEEDALPLEEITQELASQYLRFIELFGRKPTHLDSHHHVHMFPQIFPIVARFAAEEGIALRIDRQPLSNAG
DLPANLRSSQGFSSAFYGEEISEALFLQVLDDASHRGDPSLEVMCHPAFIDNTIRQSAYCFPRLTELEVLTSASLKYAIA
ERGYRLGSYLDV
>Mature_252_residues
MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRDEPSLAIGMHFVLTMGKPLTAMPGLTRDG
VLGKWIWQLAEEDALPLEEITQELASQYLRFIELFGRKPTHLDSHHHVHMFPQIFPIVARFAAEEGIALRIDRQPLSNAG
DLPANLRSSQGFSSAFYGEEISEALFLQVLDDASHRGDPSLEVMCHPAFIDNTIRQSAYCFPRLTELEVLTSASLKYAIA
ERGYRLGSYLDV

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Homo sapiens, GI63054868, Length=302, Percent_Identity=29.1390728476821, Blast_Score=92, Evalue=5e-19,
Organism=Escherichia coli, GI1788028, Length=252, Percent_Identity=92.8571428571429, Blast_Score=479, Evalue=1e-137,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 27956; Mature: 27956

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRDEPSLAIGM
CCCEEEEECCCCCCCCCCCCCHHHHHHCCCEECHHHEECCHHHHHHHHCCCCCCCHHHHH
HFVLTMGKPLTAMPGLTRDGVLGKWIWQLAEEDALPLEEITQELASQYLRFIELFGRKPT
HHEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
HLDSHHHVHMFPQIFPIVARFAAEEGIALRIDRQPLSNAGDLPANLRSSQGFSSAFYGEE
CCCCCCEEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ISEALFLQVLDDASHRGDPSLEVMCHPAFIDNTIRQSAYCFPRLTELEVLTSASLKYAIA
HHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ERGYRLGSYLDV
HCCCCCCCCCCC
>Mature Secondary Structure
MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRDEPSLAIGM
CCCEEEEECCCCCCCCCCCCCHHHHHHCCCEECHHHEECCHHHHHHHHCCCCCCCHHHHH
HFVLTMGKPLTAMPGLTRDGVLGKWIWQLAEEDALPLEEITQELASQYLRFIELFGRKPT
HHEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
HLDSHHHVHMFPQIFPIVARFAAEEGIALRIDRQPLSNAGDLPANLRSSQGFSSAFYGEE
CCCCCCEEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ISEALFLQVLDDASHRGDPSLEVMCHPAFIDNTIRQSAYCFPRLTELEVLTSASLKYAIA
HHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ERGYRLGSYLDV
HCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA