Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yeaC [H]
Identifier: 30062961
GI number: 30062961
Start: 1519150
End: 1519422
Strand: Direct
Name: yeaC [H]
Synonym: S1561
Alternate gene names: 30062961
Gene position: 1519150-1519422 (Clockwise)
Preceding gene: 30062960
Following gene: 30062962
Centisome position: 33.03
GC content: 45.42
Gene sequence:
>273_bases ATGAATCTTGATGACATTATCAACAGCATGACGCCTGAGGTATACCAGCGTTTGTCGACCGCCGTTGAACTGGGGAAATG GCCTGATGGCGTTGCGTTGACCGAGGAACAAAAAGAGAATTGCCTGCAACTGGTGATGCTGTGGCAAGCCCGCCATAATA CCGAAGCACAGCATATGACAATTGACACAAATGGTCAGATGGTCATGAAGAGCAAACAGCAGTTAAAAGAAGATTTTGGT ATCTCAGCAAAGCCTATTGCCATGTTTAAGTAA
Upstream 100 bases:
>100_bases TTAACTCTGCTTCTTTACGCTTCACTGATGGCGAAAACGGCGAAGAAATCAACGGTTGAAAAAACGATTCAGCAACTTAT TCCACAGGAGCGGAAAAATT
Downstream 100 bases:
>100_bases GTGGTTCATCCCCTTTTTGCCGCGGCTATGAAGGGGATAGCCAACAATGACCCCACGACTCGTCTCAATTATCTCGACCC GACCTGGCTAAGTCCCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNTEAQHMTIDTNGQMVMKSKQQLKEDFG ISAKPIAMFK
Sequences:
>Translated_90_residues MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNTEAQHMTIDTNGQMVMKSKQQLKEDFG ISAKPIAMFK >Mature_90_residues MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNTEAQHMTIDTNGQMVMKSKQQLKEDFG ISAKPIAMFK
Specific function: Unknown
COG id: COG3139
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081972, Length=90, Percent_Identity=97.7777777777778, Blast_Score=185, Evalue=5e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009749 [H]
Pfam domain/function: PF07023 DUF1315 [H]
EC number: NA
Molecular weight: Translated: 10296; Mature: 10296
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 7.8 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 7.8 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNTEAQHMT CCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE IDTNGQMVMKSKQQLKEDFGISAKPIAMFK ECCCCCHHHHHHHHHHHHHCCCCCCEECCC >Mature Secondary Structure MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNTEAQHMT CCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE IDTNGQMVMKSKQQLKEDFGISAKPIAMFK ECCCCCHHHHHHHHHHHHHCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]