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The map label for this gene is yoaF

Identifier: 30062948

GI number: 30062948

Start: 1506608

End: 1506862

Strand: Direct

Name: yoaF

Synonym: S1546

Alternate gene names: 30062948

Gene position: 1506608-1506862 (Clockwise)

Preceding gene: 30062946

Following gene: 30062952

Centisome position: 32.76

GC content: 52.55

Gene sequence:

>255_bases
ATGAAAATTATCAGTTTTGTTCTGCCTTGCTTGCTGGTCCTGGCTGGTTGTTCAACCCCTTCTCAGCCAGAAGCACCTAA
ACCGCCGCAGATTGGTATGGCAAATCCGGCGTCGGTCTATTGCCAGCAGAAGGGCGGGACGCTCATTCCAGTGCAGACAG
CGCAAGGGGTCAGCAACAATTGCAAATTACCGGGCGGTGAAACGATTGATGAATGGGCATTGTGGCGACGGGACCATCCG
GCTGGTGAAAAATAA

Upstream 100 bases:

>100_bases
CAAGACGTAATATGTTTTGAGTGAATGTAATAAAAATAGTGCTGCAAAACAAAACGATACCGCGATACTCTAAGCTTGGA
TAAATATGTGAGATCAATAA

Downstream 100 bases:

>100_bases
CCGCCGGATGCCGTACTAAAATCACAAGCTACGTAGCCAGTCGGCCAGCACCAGCGCATGGTTCTGCGTGGTGTTTTTTG
CTGCGTAGAGCAGGGTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQKGGTLIPVQTAQGVSNNCKLPGGETIDEWALWRRDHP
AGEK

Sequences:

>Translated_84_residues
MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQKGGTLIPVQTAQGVSNNCKLPGGETIDEWALWRRDHP
AGEK
>Mature_84_residues
MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQKGGTLIPVQTAQGVSNNCKLPGGETIDEWALWRRDHP
AGEK

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788094, Length=84, Percent_Identity=100, Blast_Score=174, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOAF_ECOL6 (P64494)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_754092.1
- EnsemblBacteria:   EBESCT00000042489
- GeneID:   1036641
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c2198
- GeneTree:   EBGT00050000010537
- HOGENOM:   HBG673251
- OMA:   EWALFRR
- ProtClustDB:   CLSK880206
- InterPro:   IPR005590

Pfam domain/function: PF03891 DUF333

EC number: NA

Molecular weight: Translated: 8942; Mature: 8942

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQKGGTLIPVQTAQGVSNN
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC
CKLPGGETIDEWALWRRDHPAGEK
CCCCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQKGGTLIPVQTAQGVSNN
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC
CKLPGGETIDEWALWRRDHPAGEK
CCCCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157