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The map label for this gene is ydcL [H]

Identifier: 30062902

GI number: 30062902

Start: 1456868

End: 1457524

Strand: Direct

Name: ydcL [H]

Synonym: S1495

Alternate gene names: 30062902

Gene position: 1456868-1457524 (Clockwise)

Preceding gene: 30062901

Following gene: 30062904

Centisome position: 31.68

GC content: 44.75

Gene sequence:

>657_bases
ATGCGTACCACATCATTTGCGAAAGTTGCAGCTTTATGCGGCTTGTTGGCTCTGTCTGGTTGTGCCTCTAAAATCACCCA
GCCAGATAAATATAACAATTACTCTGATTTAAAAGAAACAACCTCAGCAACAGGTAAACCTGTTTTACGTTGGGTAGACC
CGAGTTTTGATCAAAGCAAATATGACAGCATCGTCTGGAACCCAATCACTTATTATCCGGTACCAAAACCTTCTACCCAG
GTAGGGCAGAAAGTTCTGGATAAAATTTTGAACTATACCAACACCGAAATGAAAGAAGCGATAGCGCAGCGTAAACCAGT
GGTTACCACCGCTGGGCCGCGTAGTCTGATTTTCCGTGGGGCCATTACCGGTGTAGATACCAGCAAAGAAGGGCTGCAAT
TCTATGAAGTGGTTCCTGTTGCATTAGTGGTTGCGGGGACGCAAATGGCTACAGGCCACCGTACCATGGATACTCGCCTC
TATTTTGAAGGTGAGCTGATTGATGCAGCGACTAATAAACCGGTTATCAAAGTCGTTCGTCAGGGCGAAGGTAAAGACCT
GAATAACGAAAGTACGCCAATGGCTTTCGAAAATATTAAACAAGTTATTGATGACATGGCGACCGATGCCACCATGTTTG
ACGTTAACAAAAAGTAG

Upstream 100 bases:

>100_bases
CTGAAAAATTTATTTTCACCAACACTTTTTTTGCCACAACACGAAGCGGCGCTTTTTGCTATAACTTAGAAAGTAATATA
ATCATCTCAGGAAACTATTC

Downstream 100 bases:

>100_bases
TTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGC
GCGGTTTTCCACCTGACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRTTSFAKVAALCGLLALSGCASKITQPDKYNNYSDLKETTSATGKPVLRWVDPSFDQSKYDSIVWNPITYYPVPKPSTQ
VGQKVLDKILNYTNTEMKEAIAQRKPVVTTAGPRSLIFRGAITGVDTSKEGLQFYEVVPVALVVAGTQMATGHRTMDTRL
YFEGELIDAATNKPVIKVVRQGEGKDLNNESTPMAFENIKQVIDDMATDATMFDVNKK

Sequences:

>Translated_218_residues
MRTTSFAKVAALCGLLALSGCASKITQPDKYNNYSDLKETTSATGKPVLRWVDPSFDQSKYDSIVWNPITYYPVPKPSTQ
VGQKVLDKILNYTNTEMKEAIAQRKPVVTTAGPRSLIFRGAITGVDTSKEGLQFYEVVPVALVVAGTQMATGHRTMDTRL
YFEGELIDAATNKPVIKVVRQGEGKDLNNESTPMAFENIKQVIDDMATDATMFDVNKK
>Mature_218_residues
MRTTSFAKVAALCGLLALSGCASKITQPDKYNNYSDLKETTSATGKPVLRWVDPSFDQSKYDSIVWNPITYYPVPKPSTQ
VGQKVLDKILNYTNTEMKEAIAQRKPVVTTAGPRSLIFRGAITGVDTSKEGLQFYEVVPVALVVAGTQMATGHRTMDTRL
YFEGELIDAATNKPVIKVVRQGEGKDLNNESTPMAFENIKQVIDDMATDATMFDVNKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787701, Length=222, Percent_Identity=97.7477477477478, Blast_Score=444, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021747 [H]

Pfam domain/function: PF11769 DUF3313 [H]

EC number: NA

Molecular weight: Translated: 24009; Mature: 24009

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTTSFAKVAALCGLLALSGCASKITQPDKYNNYSDLKETTSATGKPVLRWVDPSFDQSK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCHH
YDSIVWNPITYYPVPKPSTQVGQKVLDKILNYTNTEMKEAIAQRKPVVTTAGPRSLIFRG
CCCEEECCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCHHHHHHH
AITGVDTSKEGLQFYEVVPVALVVAGTQMATGHRTMDTRLYFEGELIDAATNKPVIKVVR
HCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEECCEEECCCCCCHHHHHHH
QGEGKDLNNESTPMAFENIKQVIDDMATDATMFDVNKK
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCC
>Mature Secondary Structure
MRTTSFAKVAALCGLLALSGCASKITQPDKYNNYSDLKETTSATGKPVLRWVDPSFDQSK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCHH
YDSIVWNPITYYPVPKPSTQVGQKVLDKILNYTNTEMKEAIAQRKPVVTTAGPRSLIFRG
CCCEEECCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCHHHHHHH
AITGVDTSKEGLQFYEVVPVALVVAGTQMATGHRTMDTRLYFEGELIDAATNKPVIKVVR
HCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEECCEEECCCCCCHHHHHHH
QGEGKDLNNESTPMAFENIKQVIDDMATDATMFDVNKK
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]