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The map label for this gene is hrpA

Identifier: 30062885

GI number: 30062885

Start: 1435201

End: 1439046

Strand: Direct

Name: hrpA

Synonym: S1472

Alternate gene names: 30062885

Gene position: 1435201-1439046 (Clockwise)

Preceding gene: 30062881

Following gene: 30062887

Centisome position: 31.2

GC content: 53.87

Gene sequence:

>3846_bases
ATGCTGCGCGACAGACTGCGTTTTTCTCGCCGTCTGCATTGTGTTAAGAAGGTTAAAAATCCTGATGCACAACAGGCCAT
TTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCACGACCGGAAATCACTT
ATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATACTCGAAGCGATTCGTGATCACCAGGTGGTGATCGTCGCC
GGGGAAACCGGCTCCGGTAAAACGACTCAGCTACCGAAAATCTGTATGGAGCTGGGGCGCGGTATTAAAGGGCTGATCGG
TCATACCCAGCCGCGTCGCCTGGCGGCACGAACGGTGGCCAACCGTATTGCGGAAGAGCTGAAAACGGAGCCGGGCGGTT
GCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGGATCCTGCTG
GCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACCATCATTATTGACGAAGCGCACGAACGCAGCCTGAATAT
CGATTTTCTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCG
ACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGC
TATCGCCCGATTGTTGAAGAAGCCGATGACACCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTAAG
CCAGGAAAGCCCCGGCGACATTCTGATCTTTATGAGCGGCGAGCGGGAAATTCGCGATACCGCCGATGCGCTGAACAAGC
TGAACTTACGCCATACCGAAATCTTGCCGCTTTATGCGCGGCTTTCGAACAGCGAACAGAACCGCGTGTTCCAGTCGCAC
AGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACCTCGCTGACCGTACCGGGGATTAAATACGTCATCGACCC
CGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAACCCATTTCGCAGGCGTCTG
CCAATCAGCGTAAAGGCCGCTGTGGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCG
CGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGG
CGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCTCGAAGAACTGG
GCGCGATCACCACGGATGAACAGGCCAGCGCCTATAAACTGACGCCGCTCGGTCGCCAGCTCTCGCAGTTGCCTGTCGAC
CCACGTCTGGCGCGTATGGTGCTGGAAGCGCAAAAACATGGCTGCGTGCGTGAGGCGATGATTATCACGTCCGCGCTCTC
CATCCAGGATCCGCGCGAACGTCCGATGGACAAACAGCAGGCATCGGACGAAAAACATCGTCGCTTCCACGACAAAGAAT
CCGACTTCCTCGCGTTTGTAAATCTGTGGAATTATCTTGGCGAGCAGCAAAAGGCGCTTTCTTCCAACGCCTTCCGTCGC
CTGTGTCGTACCGATTACCTCAACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGCCAGGTGGTGAA
AGAACTTGGCATTCCGGTCAACAGCGAACCGGCGGAGTATCGTGAAATTCACATCGCCTTACTGACCGGTTTGCTTTCCC
ATATCGGCATGAAAGATGCCGATAAACAGGAATATACCGGTGCACGTAACGCGCGTTTCTCCATCTTCCCCGGTTCTGGT
TTATTCAAAAAGCCGCCGAAATGGGTAATGGTGGCGGAACTGGTAGAAACCAGCCGCCTGTGGGGGCGCATTGCTGCGCG
TATCGACCCGGAATGGGTAGAACCCGTTGCTCAGCATTTGATTAAACGCACCTACAGCGAACCGCACTGGGAACGGGCGC
AGGGCGCGGTGATGGCAACGGAAAAAGTCACTGTTTATGGTTTGCCGATTGTTGCTGCGCGCAAGGTCAACTACAGCCAG
ATCGATTCGGCGTTATGTCGTGAACTCTTTATTCGCCACGCTCTGGTGGAAGGTGACTGGCAGACGCGTCACGCATTCTT
CCGTGAAAACCTGAAACTGCGGGCCGAAGTGGAAGAGCTGGAACACAAATCACGTCGCCGCGATATTCTGGTTGATGACG
AAACGCTGTTTGAGTTCTACGACCAGCGCATCAGCCACGATGTAATCTCCGCTCGTCACTTCGATAGCTGGTGGAAAAAA
GTCAGCCGCGAAACGCCTGATTTGCTCAACTTTGAAAAGAGCATGTTGATCAAAGAAGGGGCGGAAAAAATCAGCAAGCT
GGATTACCCGAACTTCTGGCATCAGGGCAATCTCAAGCTGCGTTTGAGCTATCAGTTTGAGCCAGGCGCGGACGCGGACG
GTGTGACCGTACATATTCCGCTGCCGTTACTTAACCAGGTTGAGGAAAGCGGGTTTGAATGGCAGATCCCCGGTCTGCGC
CGCGAATTGGTGATTGCTCTGATTAAATCGTTGCCGAAACCGGTACGCCGTAATTTTGTGCCTGCACCAAACTACGCCGA
AGCGTTTTTAGGCCGCGTCACACCGCTGGAGTTACCGTTGCTCGACAGCCTTGAGCGCGAGTTACGGCGGATGACCGGCG
TTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATCACCTTCCGCGTGGTGGATGACAAA
AACAAGAAGCTAAAAGAAGGGCGCTCGCTACAAGATCTGAAAGATGCGCTGAAAGGCAAAGTGCAGGAAACGCTGTCCGC
GGTGGCGGATGACGGTATCGAGCAGAGCGGCTTACATATCTGGAGTTTTGGTCAGCTGCCGGAAAGTTACGAACAGAAGC
GTGGCAACTATAAAGTGAAGGCGTGGCCGGCGCTGGTGGATGAACGCGACAGCGTGACGATCAAACTGTTTGATAACCCG
CTGGAGCAAAAACAGGCAATGTGGAATGGTCTTCGCCGTCTACTGCTGCTAAATATTTCCTCGCCGATCAAGTATTTACA
TGAGAAGTTACCAAACAAAGCCAAGCTGGGGCTGTACTTTAACCCGTATGGCAAAGTGCTGGAGCTGATCGACGACTGTA
TCTCCTGCGGTGTGGATCAACTGATCGACGCCAATGGTGGCCCGGTCTGGACGGAAGAAGGCTTTGCTGCGCTGCATGAA
AAAGTGCGCGCCGAACTGAATGACACGGTGGTGGATATTGCGAAGCAGGTCGAGCAAATCCTCACTGCGGTGTTCAATAT
CAACAAACGTCTGAAAGGGCGGGTGGATATGACCATGGCACTGGGGCTTTCTGATATTAAAGCGCAGATGGGCGGGTTGG
TATATCGCGGTTTTGTCACTGGTAACGGCTTCAAACGGCTGGGCGACACGCTGCGATATTTGCAGGCGATTGAAAAACGA
CTGGAAAAACTGGCGGTTGATCCACATCGCGATCGTGCACAGATGCTGAAAGTCGAAAACGTCCAGCAGGCGTGGCAGCA
ATGGATCAACAAACTGCCGCCTGCACGTCGTGAGGATGAAGACGTGAAAGAGATCCGTTGGATGATAGAAGAGCTGCGCG
TTAGTTACTTCGCTCAACAACTTGGTACGCCTTATCCGATTTCAGATAAGCGTATTTTGCAGGCGATGGAGCAGATTAGC
GGTTAA

Upstream 100 bases:

>100_bases
TTTAAAAGAAAATTAATCAGGCAGACTACTGCCCACTAACGTTATGACAGAACAACAAAAATTGACCTTTACTGCCTTGC
AACAGCGGCTGGATTCGCTG

Downstream 100 bases:

>100_bases
CCCTGCTATTTGCCTAATAAATCTAAAACCCGGTAAGCATTTAGCGCCGGGTTTTTTATTAATTCTAAAACGGTAAGGAC
AAAAATTCAGGAATTCAGAA

Product: ATP-dependent RNA helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1281; Mature: 1281

Protein sequence:

>1281_residues
MLRDRLRFSRRLHCVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVA
GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL
AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH
SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS
RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR
LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG
LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
IDSALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKK
VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR
RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVTIKLFDNP
LEQKQAMWNGLRRLLLLNISSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHE
KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS
G

Sequences:

>Translated_1281_residues
MLRDRLRFSRRLHCVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVA
GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL
AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH
SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS
RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR
LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG
LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
IDSALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKK
VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR
RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVTIKLFDNP
LEQKQAMWNGLRRLLLLNISSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHE
KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS
G
>Mature_1281_residues
MLRDRLRFSRRLHCVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVA
GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL
AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH
SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS
RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR
LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG
LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
IDSALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKK
VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR
RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVTIKLFDNP
LEQKQAMWNGLRRLLLLNISSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHE
KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS
G

Specific function: Not yet known [H]

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4826690, Length=639, Percent_Identity=38.1846635367762, Blast_Score=421, Evalue=1e-117,
Organism=Homo sapiens, GI68509926, Length=644, Percent_Identity=35.7142857142857, Blast_Score=407, Evalue=1e-113,
Organism=Homo sapiens, GI255982614, Length=646, Percent_Identity=35.4489164086687, Blast_Score=399, Evalue=1e-111,
Organism=Homo sapiens, GI256000749, Length=649, Percent_Identity=35.2850539291217, Blast_Score=399, Evalue=1e-110,
Organism=Homo sapiens, GI20544129, Length=653, Percent_Identity=34.7626339969372, Blast_Score=387, Evalue=1e-107,
Organism=Homo sapiens, GI20336302, Length=644, Percent_Identity=34.3167701863354, Blast_Score=384, Evalue=1e-106,
Organism=Homo sapiens, GI17999539, Length=627, Percent_Identity=37.1610845295056, Blast_Score=382, Evalue=1e-105,
Organism=Homo sapiens, GI38158022, Length=553, Percent_Identity=35.9855334538879, Blast_Score=355, Evalue=1e-97,
Organism=Homo sapiens, GI299829255, Length=605, Percent_Identity=34.2148760330578, Blast_Score=352, Evalue=2e-96,
Organism=Homo sapiens, GI261878478, Length=649, Percent_Identity=33.1278890600924, Blast_Score=346, Evalue=1e-94,
Organism=Homo sapiens, GI20336290, Length=514, Percent_Identity=34.8249027237354, Blast_Score=261, Evalue=3e-69,
Organism=Homo sapiens, GI20336294, Length=514, Percent_Identity=34.8249027237354, Blast_Score=261, Evalue=5e-69,
Organism=Homo sapiens, GI167830433, Length=566, Percent_Identity=31.6254416961131, Blast_Score=260, Evalue=5e-69,
Organism=Homo sapiens, GI261878481, Length=599, Percent_Identity=29.7161936560935, Blast_Score=258, Evalue=3e-68,
Organism=Homo sapiens, GI166851804, Length=596, Percent_Identity=31.8791946308725, Blast_Score=256, Evalue=1e-67,
Organism=Homo sapiens, GI167830436, Length=563, Percent_Identity=31.2611012433393, Blast_Score=251, Evalue=4e-66,
Organism=Homo sapiens, GI100913206, Length=648, Percent_Identity=29.0123456790123, Blast_Score=232, Evalue=2e-60,
Organism=Homo sapiens, GI20336300, Length=647, Percent_Identity=27.2024729520866, Blast_Score=223, Evalue=1e-57,
Organism=Homo sapiens, GI163914394, Length=646, Percent_Identity=26.3157894736842, Blast_Score=194, Evalue=6e-49,
Organism=Homo sapiens, GI29029601, Length=419, Percent_Identity=30.5489260143198, Blast_Score=172, Evalue=2e-42,
Organism=Homo sapiens, GI67782362, Length=202, Percent_Identity=44.5544554455446, Blast_Score=168, Evalue=3e-41,
Organism=Homo sapiens, GI269847874, Length=189, Percent_Identity=40.7407407407407, Blast_Score=149, Evalue=1e-35,
Organism=Homo sapiens, GI39777586, Length=346, Percent_Identity=31.2138728323699, Blast_Score=147, Evalue=5e-35,
Organism=Escherichia coli, GI145693127, Length=1281, Percent_Identity=99.4535519125683, Blast_Score=2616, Evalue=0.0,
Organism=Escherichia coli, GI87081693, Length=441, Percent_Identity=35.3741496598639, Blast_Score=239, Evalue=8e-64,
Organism=Caenorhabditis elegans, GI17535281, Length=641, Percent_Identity=36.3494539781591, Blast_Score=411, Evalue=1e-114,
Organism=Caenorhabditis elegans, GI17554326, Length=630, Percent_Identity=37.7777777777778, Blast_Score=407, Evalue=1e-113,
Organism=Caenorhabditis elegans, GI25144243, Length=673, Percent_Identity=33.5809806835067, Blast_Score=384, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI17531507, Length=641, Percent_Identity=35.5694227769111, Blast_Score=381, Evalue=1e-105,
Organism=Caenorhabditis elegans, GI32565154, Length=643, Percent_Identity=34.0590979782271, Blast_Score=377, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI17556386, Length=646, Percent_Identity=35.4489164086687, Blast_Score=367, Evalue=1e-101,
Organism=Caenorhabditis elegans, GI71990212, Length=677, Percent_Identity=32.0531757754801, Blast_Score=348, Evalue=2e-95,
Organism=Caenorhabditis elegans, GI71996313, Length=562, Percent_Identity=34.6975088967972, Blast_Score=295, Evalue=8e-80,
Organism=Caenorhabditis elegans, GI86562256, Length=590, Percent_Identity=27.6271186440678, Blast_Score=181, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17552054, Length=445, Percent_Identity=28.5393258426966, Blast_Score=159, Evalue=8e-39,
Organism=Caenorhabditis elegans, GI17507503, Length=367, Percent_Identity=29.1553133514986, Blast_Score=149, Evalue=9e-36,
Organism=Saccharomyces cerevisiae, GI6320850, Length=635, Percent_Identity=36.3779527559055, Blast_Score=420, Evalue=1e-118,
Organism=Saccharomyces cerevisiae, GI6321318, Length=647, Percent_Identity=36.4760432766615, Blast_Score=414, Evalue=1e-116,
Organism=Saccharomyces cerevisiae, GI6322939, Length=648, Percent_Identity=37.962962962963, Blast_Score=363, Evalue=1e-100,
Organism=Saccharomyces cerevisiae, GI6324338, Length=664, Percent_Identity=34.1867469879518, Blast_Score=345, Evalue=2e-95,
Organism=Saccharomyces cerevisiae, GI6322772, Length=661, Percent_Identity=33.7367624810893, Blast_Score=332, Evalue=3e-91,
Organism=Saccharomyces cerevisiae, GI6323451, Length=594, Percent_Identity=28.4511784511784, Blast_Score=231, Evalue=6e-61,
Organism=Saccharomyces cerevisiae, GI6323776, Length=217, Percent_Identity=41.0138248847926, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI20129977, Length=646, Percent_Identity=37.6160990712074, Blast_Score=411, Evalue=1e-114,
Organism=Drosophila melanogaster, GI19921728, Length=643, Percent_Identity=35.303265940902, Blast_Score=406, Evalue=1e-113,
Organism=Drosophila melanogaster, GI19921526, Length=672, Percent_Identity=35.7142857142857, Blast_Score=406, Evalue=1e-113,
Organism=Drosophila melanogaster, GI18859729, Length=637, Percent_Identity=36.8916797488226, Blast_Score=382, Evalue=1e-105,
Organism=Drosophila melanogaster, GI19920696, Length=646, Percent_Identity=35.9133126934984, Blast_Score=377, Evalue=1e-104,
Organism=Drosophila melanogaster, GI45550174, Length=659, Percent_Identity=34.2943854324734, Blast_Score=365, Evalue=1e-100,
Organism=Drosophila melanogaster, GI24643238, Length=560, Percent_Identity=33.5714285714286, Blast_Score=313, Evalue=7e-85,
Organism=Drosophila melanogaster, GI24585491, Length=615, Percent_Identity=29.7560975609756, Blast_Score=271, Evalue=2e-72,
Organism=Drosophila melanogaster, GI24642763, Length=535, Percent_Identity=31.0280373831776, Blast_Score=236, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24585920, Length=522, Percent_Identity=31.6091954022989, Blast_Score=228, Evalue=2e-59,
Organism=Drosophila melanogaster, GI17136342, Length=525, Percent_Identity=31.6190476190476, Blast_Score=227, Evalue=4e-59,
Organism=Drosophila melanogaster, GI24641942, Length=476, Percent_Identity=31.5126050420168, Blast_Score=226, Evalue=1e-58,
Organism=Drosophila melanogaster, GI17136508, Length=598, Percent_Identity=29.5986622073579, Blast_Score=199, Evalue=1e-50,
Organism=Drosophila melanogaster, GI17136242, Length=235, Percent_Identity=39.5744680851064, Blast_Score=159, Evalue=9e-39,
Organism=Drosophila melanogaster, GI24641139, Length=358, Percent_Identity=28.2122905027933, Blast_Score=135, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR011709
- InterPro:   IPR007502
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010222 [H]

Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 146785; Mature: 146785

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRDRLRFSRRLHCVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPV
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA
CHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA
HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCCEEEEHHHHHHHHHHHCEEEEECH
HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
HCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEECCCEEEEEEE
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTE
EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHH
ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK
HHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHH
VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ
HHHCCCCCHHHCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
HHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCCCC
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCCCHHHCCCHHHHHCCCCCHHHHHHH
NLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRL
HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
WGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEECEEEEEECCCHHCCCCCHHH
IDSALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECHHHHHHHH
DQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEE
RLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFV
EEEEEECCCCCCCCEEEEECCHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCHHHHHCCC
PAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCC
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVK
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCEEEE
AWPALVDERDSVTIKLFDNPLEQKQAMWNGLRRLLLLNISSPIKYLHEKLPNKAKLGLYF
ECHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEE
NPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQI
CCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
HHHHHHHHHHHCCCCCCHHHHCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHH
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQ
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGTPYPISDKRILQAMEQISG
CCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLRDRLRFSRRLHCVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPV
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA
CHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA
HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCCEEEEHHHHHHHHHHHCEEEEECH
HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
HCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEECCCEEEEEEE
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTE
EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHH
ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK
HHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHH
VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ
HHHCCCCCHHHCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
HHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCCCC
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCCCHHHCCCHHHHHCCCCCHHHHHHH
NLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRL
HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
WGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEECEEEEEECCCHHCCCCCHHH
IDSALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECHHHHHHHH
DQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEE
RLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFV
EEEEEECCCCCCCCEEEEECCHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCHHHHHCCC
PAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCC
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVK
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCEEEE
AWPALVDERDSVTIKLFDNPLEQKQAMWNGLRRLLLLNISSPIKYLHEKLPNKAKLGLYF
ECHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEE
NPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQI
CCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
HHHHHHHHHHHCCCCCCHHHHCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHH
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQ
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGTPYPISDKRILQAMEQISG
CCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7899078; 9097039; 9278503 [H]