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The map label for this gene is ynbB [H]

Identifier: 30062880

GI number: 30062880

Start: 1429201

End: 1429944

Strand: Direct

Name: ynbB [H]

Synonym: S1465

Alternate gene names: 30062880

Gene position: 1429201-1429944 (Clockwise)

Preceding gene: 30062879

Following gene: 30062881

Centisome position: 31.07

GC content: 43.41

Gene sequence:

>744_bases
GTGATTTCAGGCCCACGCTGGATGACGTTGACGTTTTTTACGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCT
TATATCCGTACATTTTTCGCGTTGGTTATATTGGGTTATTCCTCTTAACTATTTGCTTATCGGTTTTAATTGCTTTGAGC
TGTTTCTGTTATTTATACCTTTGACTGGGTTTCTGATATTAGCCACCTGGCGAGTTTTTGTGGGTGACCCCTCCGGTTTT
CAGCATACCGTGAGCGCCATTTTTTGGGGATGGATAATGACCGTTTTTGCCTTGAGTCATGCCGCCTGGCTATTAATGTT
GCCAACCATAAATATCCAGGGCGGGGCGTTACTGGTGTTATTTCTTTTGGCGTTAACCGAGTCAAACGATATTGCACAGT
ATTTATGGGGGAAATCCTGCGGCAGAAGAAAAGTGGTCCCCAAAGTCAGCCCGGGAAAAACGCTGGAAGGTCTGCTGGGG
GGCGTAATCACCACCATGATTGCGTCACTGATTATTGGACCGTTGCTGACACCGCTAAATACATTACAGGCATTATTAGC
GGGTTTGTTAATTGGTATTAGTGGTTTTTGCGGCGATGTAGTGATGTCAGCCATCAAACGAGATATTGGTGTTAAAGATA
GTGGAAAACTATTACTAGGACATGGCGGACTCCTTGACAGGATTGACTCATTAATTTTCACCGCTCCGGTATTTTTTTAT
TTTATTCGCTACTGCTGTTACTGA

Upstream 100 bases:

>100_bases
GATAAACCGTTTTCTGCTATGGCGGTTACCTGAGAGAAAAGGGGATGAAGTTACATTACGTATTCGTACCTGGTGGGGCA
TCGTCATTTGTTTTTCACTG

Downstream 100 bases:

>100_bases
AGGAAAATAGAGAAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCATTGTATTA
TCGGCACTGGCCCACTTTAC

Product: putative phosphatidate cytidiltransferase

Products: diphosphate; CDPdiacylglycerol

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MISGPRWMTLTFFTLISFLALKEYCTLISVHFSRWLYWVIPLNYLLIGFNCFELFLLFIPLTGFLILATWRVFVGDPSGF
QHTVSAIFWGWIMTVFALSHAAWLLMLPTINIQGGALLVLFLLALTESNDIAQYLWGKSCGRRKVVPKVSPGKTLEGLLG
GVITTMIASLIIGPLLTPLNTLQALLAGLLIGISGFCGDVVMSAIKRDIGVKDSGKLLLGHGGLLDRIDSLIFTAPVFFY
FIRYCCY

Sequences:

>Translated_247_residues
MISGPRWMTLTFFTLISFLALKEYCTLISVHFSRWLYWVIPLNYLLIGFNCFELFLLFIPLTGFLILATWRVFVGDPSGF
QHTVSAIFWGWIMTVFALSHAAWLLMLPTINIQGGALLVLFLLALTESNDIAQYLWGKSCGRRKVVPKVSPGKTLEGLLG
GVITTMIASLIIGPLLTPLNTLQALLAGLLIGISGFCGDVVMSAIKRDIGVKDSGKLLLGHGGLLDRIDSLIFTAPVFFY
FIRYCCY
>Mature_247_residues
MISGPRWMTLTFFTLISFLALKEYCTLISVHFSRWLYWVIPLNYLLIGFNCFELFLLFIPLTGFLILATWRVFVGDPSGF
QHTVSAIFWGWIMTVFALSHAAWLLMLPTINIQGGALLVLFLLALTESNDIAQYLWGKSCGRRKVVPKVSPGKTLEGLLG
GVITTMIASLIIGPLLTPLNTLQALLAGLLIGISGFCGDVVMSAIKRDIGVKDSGKLLLGHGGLLDRIDSLIFTAPVFFY
FIRYCCY

Specific function: Unknown

COG id: COG4589

COG function: function code R; Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI1787677, Length=247, Percent_Identity=94.7368421052632, Blast_Score=443, Evalue=1e-126,
Organism=Escherichia coli, GI87081696, Length=136, Percent_Identity=41.1764705882353, Blast_Score=97, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: 2.7.7.41

Molecular weight: Translated: 27409; Mature: 27409

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCC
>Mature Secondary Structure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HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CTP; phosphatidate

Specific reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]