Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is ycjU

Identifier: 30062836

GI number: 30062836

Start: 1374913

End: 1375572

Strand: Direct

Name: ycjU

Synonym: S1406

Alternate gene names: 30062836

Gene position: 1374913-1375572 (Clockwise)

Preceding gene: 30062835

Following gene: 30062837

Centisome position: 29.89

GC content: 56.67

Gene sequence:

>660_bases
ATGAAACTGCAAGGGGTAATTTTCGATCTGGATGGTGTAATCACCGATACCGCGCATCTGCATTTCCAGGCGTGGCAGCA
GATTGCCGCTGAAATTGGCATCAGTATTGATGCGCAGTTTAACGAATCTCTAAAAGGGATCAGCCGCGATGAGTCTCTGC
GGCGCATTCTGCAACACGGGGGCAAAGAGGGCGACTTTAACCCGCAGGAGCGGGCGCAACTGGCGTATCGCAAAAATCTG
CTTTACGTCCACTCACTGCGCGAGCTGACGGTTAATGCTGTGCTGCCCGGTATTCGCAATTTGCTGGCAGAGCTCCGTGC
ACAGCAGATTCCGGTAGGGCTGGCTTCCGTCTCCCTGAATGCGCCGACGATTTTAGCGGCGCTGGAGCTGCGTGAGTTTT
TCACCTTCTGCGCGGATGCTTCCCAACTTAAAAACTCGAAACCGGATCCGGAAATCTTTCTCGCTGCCTGTGCCGGGCTG
GGCGTGCCGCCGCAGGCATGTATCGGCATTGAAGATGCGCAGGCGGGCATTGACGCCATTAACGCCAGCGGTATGCGCTC
GGTGGGGATCGGTGCGGGCTTAACCGGGGCGCAATTACTGTTGCCCTCAACGGACTCCCTGACCTGGTCGCGGTTATCGG
CCTTCTGGCAAAACGTATAG

Upstream 100 bases:

>100_bases
TGGACGGTCAGCTTATATCCGTGGCTGAAGAATCTGTTTTCTGTTTGGGTGATTTTATTTTGCCCTTCAATGGGACCGCT
ACCACGCATCAGGAGGATGA

Downstream 100 bases:

>100_bases
CAAAGGAATCAACATGGCTCAGCTTTCGTTACAACATATTCAAAAAATCTACGATAACCAGGTGCATGTGGTGAAGGACT
TCAACCTGGAAATTGCCGAT

Product: putative beta-phosphoglucomutase

Products: NA

Alternate protein names: Beta-PGM [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNPQERAQLAYRKNL
LYVHSLRELTVNAVLPGIRNLLAELRAQQIPVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGL
GVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTDSLTWSRLSAFWQNV

Sequences:

>Translated_219_residues
MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNPQERAQLAYRKNL
LYVHSLRELTVNAVLPGIRNLLAELRAQQIPVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGL
GVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTDSLTWSRLSAFWQNV
>Mature_219_residues
MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNPQERAQLAYRKNL
LYVHSLRELTVNAVLPGIRNLLAELRAQQIPVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGL
GVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTDSLTWSRLSAFWQNV

Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Homo sapiens, GI197382691, Length=199, Percent_Identity=28.643216080402, Blast_Score=72, Evalue=3e-13,
Organism=Escherichia coli, GI1787576, Length=219, Percent_Identity=97.2602739726027, Blast_Score=432, Evalue=1e-122,
Organism=Escherichia coli, GI1789046, Length=191, Percent_Identity=30.8900523560209, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788021, Length=188, Percent_Identity=30.3191489361702, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1789787, Length=212, Percent_Identity=25.4716981132075, Blast_Score=63, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17137324, Length=197, Percent_Identity=28.4263959390863, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI116008157, Length=200, Percent_Identity=27.5, Blast_Score=70, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010976
- InterPro:   IPR010972
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =5.4.2.6 [H]

Molecular weight: Translated: 23602; Mature: 23602

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHG
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHCC
GKEGDFNPQERAQLAYRKNLLYVHSLRELTVNAVLPGIRNLLAELRAQQIPVGLASVSLN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAI
CCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCHHHHCCCCHHHHCHHHH
NASGMRSVGIGAGLTGAQLLLPSTDSLTWSRLSAFWQNV
CCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHG
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHCC
GKEGDFNPQERAQLAYRKNLLYVHSLRELTVNAVLPGIRNLLAELRAQQIPVGLASVSLN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAI
CCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCHHHHCCCCHHHHCHHHH
NASGMRSVGIGAGLTGAQLLLPSTDSLTWSRLSAFWQNV
CCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]