Click here to switch to the map view.

The map label for this gene is yciV

Identifier: 30062789

GI number: 30062789

Start: 1319407

End: 1320288

Strand: Direct

Name: yciV

Synonym: S1354

Alternate gene names: 30062789

Gene position: 1319407-1320288 (Clockwise)

Preceding gene: 30062779

Following gene: 30062790

Centisome position: 28.69

GC content: 54.08

Gene sequence:

>882_bases
TTGAGCGACACGAATTATGCAGTGATTTACGACCTGCACAGCCATACCACAGCTTCCGATGGCTGCCTGACGCCAGAAGC
ATTGGTGCACCGTGCAGTCGAGATGCGCGTCGGCACCCTGGCGATCACCGACCATGACACCACAGCTGCAATCGCGCCAG
CAAGAGAGGAAATTTCACGTTCGGGACTGGCGCTGAATCTTATTCCCGGCGTGGAAATTTCCACGGTCTGGGAAAATCAT
GAAATTCATATTGTCGGGCTGAATATTGATATTACTCATCCGCTAATGTGTGAGTTCCTCGCGCAGCAGACAGAACGGCG
CAATCAGCGGGCGCAGCAAATTGCCGAAAGACTTGAAAAAGCGCAAATACCTGGGGCGCTGGAAGGCGCACAACGACTGG
CGCAGGGCGGCGCAGTGACGCGCGGTCATTTTGCGCGTTTCCTTGTGGAGTGCGGCAAAGCCAGTTCAATGGCAGATGTC
TTTAAAAAGTATCTGGCGCGCGGGAAAACCGGATACGTTCCGCCACAGTGGTGTACAATAGAACAAGCTATTGATGTCAT
TCATCATTCTGGCGGTAAGGCGGTGCTAGCTCATCCTGGGCGGTACAATCTTAGTGCTAAATGGCTGAAAAGATTGGTTG
CGCATTTTGCCGAACACCACGGCGACGCGATGGAAGTCGCGCAGTGCCAGCAATCGCCCAATGAACGCACCCAGCTGGCC
ACACTTGCGCGTCAGCATCATTTATGGGCATCACAAGGATCTGATTTTCATCAGCCATGCCCGTGGATCGAACTGGGTCG
TAAACTCTGGCTGCCCGCAGGCGTTGAAGGCGTCTGGCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTAT
GA

Upstream 100 bases:

>100_bases
AACTGGTTCGATGATTAATTGTCAACAGCTCATTTCAGAATATTTGCCAGACCCGTTATGATGTCGGCGCAAAAAACATT
ATCCAGAACGGGAGTGCGCC

Downstream 100 bases:

>100_bases
GCCAGTTTTTTTATATTCATCCTGATAACCCGCAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGG
GTGATTGTCTATCCAACTGA

Product: putative enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISRSGLALNLIPGVEISTVWENH
EIHIVGLNIDITHPLMCEFLAQQTERRNQRAQQIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADV
FKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLA
TLARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL

Sequences:

>Translated_293_residues
MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISRSGLALNLIPGVEISTVWENH
EIHIVGLNIDITHPLMCEFLAQQTERRNQRAQQIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADV
FKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLA
TLARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL
>Mature_292_residues
SDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISRSGLALNLIPGVEISTVWENHE
IHIVGLNIDITHPLMCEFLAQQTERRNQRAQQIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADVF
KKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLAT
LARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=293, Percent_Identity=99.3174061433447, Blast_Score=602, Evalue=1e-174,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 32625; Mature: 32494

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISR
CCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCHHCCCCHHHHHH
SGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQQTERRNQRAQQIAERLEK
CCCEEEEECCCEEEEEECCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADVFKKYLARGKTGYVPPQWCTI
HCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHH
EQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLA
HHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHH
TLARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL
HHHHHHHHHHCCCCCCCCCCCHHHHCHHHCCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISR
CCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCHHCCCCHHHHHH
SGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQQTERRNQRAQQIAERLEK
CCCEEEEECCCEEEEEECCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADVFKKYLARGKTGYVPPQWCTI
HCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHH
EQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLA
HHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHH
TLARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL
HHHHHHHHHHCCCCCCCCCCCHHHHCHHHCCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]