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The map label for this gene is insF1 [C]

Identifier: 30062773

GI number: 30062773

Start: 1306023

End: 1306709

Strand: Direct

Name: insF1 [C]

Synonym: S1339

Alternate gene names: 30062773

Gene position: 1306023-1306709 (Clockwise)

Preceding gene: 30062772

Following gene: 30062775

Centisome position: 28.4

GC content: 51.67

Gene sequence:

>687_bases
GTGGCACATATCCGCACTTGCGAAACATATGGAACCCGGCGGCTCCAGACGGAGCTGGCAGAGAATGGCATCATCGTTGG
TCGTGACCGACTGGCACGTCTTCGTAAGGAGCTGAGGCTACGCTGTAAGCAGAAACGCAAGTTCAGAGCGACTACGAACC
CGAACCACAATCTGCCAGTTGCGCCAAATCTGCTGAACCAGACGTTCGCTCCTACAGCACCAAATCAGGTCTGGGTGGCG
GACCTGACGTATGTTGCTGGCATCAAAGATGTTTATACGTGCGAAATTGTCGGCTACGCCATGGGAGAGCGCATGACAAA
AGAGCTGACAGGTAAAGCCCTGTTTATGGCGCTCAGGAGCCAGCGCCCACCTGCCGGGCTAATCCACCACTCTGATCGAG
GTTCACAGTACTGCGCATACGATTACCGGGTCATACAGGAGCAGTTTGGTCTGAAAACATCAATGTCGCGTAAAGGTAAC
TGTTACGACAACGCTCCGATGGAAAGCTTCTGGGGAACGCTGAAAAATGAGAGCCTGAGCCACTATCGTTTTAATAACCG
GGATGAAGCCATCTCAGTAATACGGGAATACATTGAGATTTTCTACAATCGTCAGCGTCGTCACTCTCGTCTGGGGAATA
TCTCCCCGGCAACCTTCAGGGAAAAATATCATCAGATGGCTGCTTAA

Upstream 100 bases:

>100_bases
TCAGGTATTTGGTGTATCCAGGAGCGGTTATTACAACTGGGTACAGCATGAACCCTCAGACAGAAAACAAAGTGATGAGC
GGCTAAAACTGGAGATTAAG

Downstream 100 bases:

>100_bases
AAAAAGAACAAATGGTAGTGTCCGCTATTGCCAGTACACCTCACTACTCAGAACACTTTCTTAAATGGTTTCACTGAAAC
GTGTTCATAGACTCCTGCCG

Product: IS600 orfB

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MAHIRTCETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVA
DLTYVAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGN
CYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPATFREKYHQMAA

Sequences:

>Translated_228_residues
MAHIRTCETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVA
DLTYVAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGN
CYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPATFREKYHQMAA
>Mature_227_residues
AHIRTCETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVAD
LTYVAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNC
YDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPATFREKYHQMAA

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=194, Percent_Identity=31.9587628865979, Blast_Score=103, Evalue=1e-22,
Organism=Escherichia coli, GI1788405, Length=230, Percent_Identity=39.1304347826087, Blast_Score=160, Evalue=7e-41,
Organism=Escherichia coli, GI1787263, Length=230, Percent_Identity=39.1304347826087, Blast_Score=160, Evalue=7e-41,
Organism=Escherichia coli, GI1786753, Length=230, Percent_Identity=39.1304347826087, Blast_Score=160, Evalue=7e-41,
Organism=Escherichia coli, GI1786570, Length=230, Percent_Identity=39.1304347826087, Blast_Score=160, Evalue=7e-41,
Organism=Escherichia coli, GI1786490, Length=230, Percent_Identity=39.1304347826087, Blast_Score=160, Evalue=7e-41,
Organism=Escherichia coli, GI1789981, Length=224, Percent_Identity=33.4821428571429, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 26455; Mature: 26323

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHIRTCETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPV
CCCCCCHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
APNLLNQTFAPTAPNQVWVADLTYVAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRS
CCHHHHHCCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLS
CCCCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCC
HYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPATFREKYHQMAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AHIRTCETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPV
CCCCCHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
APNLLNQTFAPTAPNQVWVADLTYVAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRS
CCHHHHHCCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLS
CCCCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCC
HYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPATFREKYHQMAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]