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The map label for this gene is bssR

Identifier: 30062318

GI number: 30062318

Start: 818563

End: 818946

Strand: Direct

Name: bssR

Synonym: S0829

Alternate gene names: 30062318

Gene position: 818563-818946 (Clockwise)

Preceding gene: 30062316

Following gene: 30062320

Centisome position: 17.8

GC content: 48.44

Gene sequence:

>384_bases
ATGTTCGTTGACAGACAGCGAATCGATCTGCTGAACCGGTTGATCGACGCACGCGTTGACCTCGCTGCATACGTGCAACT
GAGGAAGGCAAAAGGATACATGTCCGTCAGCGAAAGCAATCATCTACGAGATAACTTTTTTAAACTGAATCGCGAACTGC
ACGATAAATCGCTGCGGTTGAATCTTCATCTGGATCAGGAAGAGTGGAGTGCTCTTCATCATGCTGAAGAAGCATTAGCG
ACAGCCGCAGTATGTTTGATGAGTGGGCACCATGATTGCCCGACTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTG
TCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGA

Upstream 100 bases:

>100_bases
TTGTTAATTCGGCGTGAAGAATTGATCCTGGACAGCATTTTGCTCAAAAAATAGCCATACTATTTAATTGCAACAAGGCT
GGAAAGAGGAGGATCGAAGT

Downstream 100 bases:

>100_bases
AAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTAC
GCTTTAAGCCAGAGTCAATC

Product: biofilm formation regulatory protein BssR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRDNFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALA
TAAVCLMSGHHDCPTVITVNADKLENCLMSLTLSIQSLQKHAMLEKA

Sequences:

>Translated_127_residues
MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRDNFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALA
TAAVCLMSGHHDCPTVITVNADKLENCLMSLTLSIQSLQKHAMLEKA
>Mature_127_residues
MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRDNFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALA
TAAVCLMSGHHDCPTVITVNADKLENCLMSLTLSIQSLQKHAMLEKA

Specific function: Represses biofilm formation in M9C glu and LB glu media but not in M9C and LB media. Seems to act as a global regulator of several genes involved in catabolite repression and stress response and regulation of the uptake and export of signaling pathways. C

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787059, Length=127, Percent_Identity=100, Blast_Score=259, Evalue=5e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): BSSR_ECO57 (P0AAY2)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   D90743
- PIR:   H85593
- RefSeq:   NP_286602.1
- RefSeq:   NP_308943.1
- ProteinModelPortal:   P0AAY2
- EnsemblBacteria:   EBESCT00000025211
- EnsemblBacteria:   EBESCT00000059345
- GeneID:   917658
- GeneID:   958146
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z1062
- KEGG:   ecs:ECs0916
- GeneTree:   EBGT00050000010078
- HOGENOM:   HBG416427
- OMA:   NANIDID
- ProtClustDB:   PRK12302
- BioCyc:   ECOL83334:ECS0916-MONOMER
- InterPro:   IPR020359
- ProDom:   PD079626

Pfam domain/function: PF10799 YliH

EC number: NA

Molecular weight: Translated: 14536; Mature: 14536

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRDNFFKLNRELHDKSLRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCEEEE
NLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNADKLENCLMSLTLSIQSLQK
EEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
HAMLEKA
HHHHCCC
>Mature Secondary Structure
MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRDNFFKLNRELHDKSLRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCEEEE
NLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNADKLENCLMSLTLSIQSLQK
EEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
HAMLEKA
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796