Click here to switch to the map view.

The map label for this gene is ybfN

Identifier: 30062143

GI number: 30062143

Start: 637848

End: 638174

Strand: Reverse

Name: ybfN

Synonym: S0622

Alternate gene names: 30062143

Gene position: 638174-637848 (Counterclockwise)

Preceding gene: 30062144

Following gene: 30062138

Centisome position: 13.88

GC content: 49.24

Gene sequence:

>327_bases
ATGAAAAAACTGATTCTCATCGCCATGATGGCATCGGGGCTGGTAGCTTGTGCGCAATCAACCGCACCACAGGAAGACAG
CCGTCTGAAAGAGGCATACAGCGCCTGTATCAACACCGCGCAAGGTTCGCCAGAAAAAATTGAAGCCTGCCAGAGCGTGT
TAAACGTGCTGAAGAAAGAGAAACAACATCAGCAGTTTGCCGACCAGGAAAGTGTACGCGTACTGGATTATCAGCAGTGT
CTGCGTGCAACGCAAACCGGACATGATCAGGCGGTGAAAGCCGATTGTGATAAGGTCTGGCAGGAAATACGCAGTAATAA
CAAATAA

Upstream 100 bases:

>100_bases
TAACATCTTCCAGGATGAGCGTGACGTGAAATTTATGGTAATCGCACCATTCACCATCTTCTGATGCCCGACGCGGCAGG
TTTTGTGCCTGCCGCATTCA

Downstream 100 bases:

>100_bases
GTGAGAGCTGTAACTCTCGCTTTTCTTATTTCCCTTGTATAAAAAAGCCAACCCGCAGGTTGGCTTTTCTCGTTCAGGCT
GGCTTATTTGCCTTCGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKKLILIAMMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKEKQHQQFADQESVRVLDYQQC
LRATQTGHDQAVKADCDKVWQEIRSNNK

Sequences:

>Translated_108_residues
MKKLILIAMMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKEKQHQQFADQESVRVLDYQQC
LRATQTGHDQAVKADCDKVWQEIRSNNK
>Mature_108_residues
MKKLILIAMMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKEKQHQQFADQESVRVLDYQQC
LRATQTGHDQAVKADCDKVWQEIRSNNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786898, Length=108, Percent_Identity=98.1481481481482, Blast_Score=218, Evalue=7e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12040; Mature: 12040

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLILIAMMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKE
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
KQHQQFADQESVRVLDYQQCLRATQTGHDQAVKADCDKVWQEIRSNNK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKLILIAMMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKE
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
KQHQQFADQESVRVLDYQQCLRATQTGHDQAVKADCDKVWQEIRSNNK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]