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The map label for this gene is ybgE

Identifier: 30062102

GI number: 30062102

Start: 578728

End: 579021

Strand: Reverse

Name: ybgE

Synonym: S0575

Alternate gene names: 30062102

Gene position: 579021-578728 (Counterclockwise)

Preceding gene: 30062103

Following gene: 30062101

Centisome position: 12.59

GC content: 50.0

Gene sequence:

>294_bases
ATGAGTAAGATTATCGCGACCTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTTTCCTTCGTGATGGCGCTTCT
GTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGC
TGATGTGGGCCGTCTGTGCTGGTGTGATTCACGGCGTGGGCTTTCGTCCGCAGAAGGTTCTTTGGCAAGGGATTTTTTGC
CCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAA

Upstream 100 bases:

>100_bases
CATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAA
GCCGGTCAAGAAGACATCTG

Downstream 100 bases:

>100_bases
ATCAGAATTCTCTTTAAAAAATTATGGGCCGCTCCAGGCCCATAAATTTTTACGCGCCCTTAACTTGCCCTCATTCCCAA
ACCTCAATCGCGCGCGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFC
PLLADIVLIVGLIFFFF

Sequences:

>Translated_97_residues
MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFC
PLLADIVLIVGLIFFFF
>Mature_96_residues
SKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFCP
LLADIVLIVGLIFFFF

Specific function: Unknown

COG id: COG3790

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786956, Length=97, Percent_Identity=100, Blast_Score=194, Evalue=7e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBGE_ECO57 (P0AAV2)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   B90725
- PIR:   C85576
- RefSeq:   NP_286463.1
- RefSeq:   NP_308797.1
- ProteinModelPortal:   P0AAV2
- EnsemblBacteria:   EBESCT00000024366
- EnsemblBacteria:   EBESCT00000055201
- GeneID:   917502
- GeneID:   957865
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z0903
- KEGG:   ecs:ECs0770
- GeneTree:   EBGT00050000011877
- HOGENOM:   HBG740102
- OMA:   AGCIFWD
- ProtClustDB:   PRK10588
- BioCyc:   ECOL83334:ECS0770-MONOMER
- InterPro:   IPR011846
- TIGRFAMs:   TIGR02112

Pfam domain/function: PF09600 Cyd_oper_YbgE

EC number: NA

Molecular weight: Translated: 10933; Mature: 10801

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCA
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GVIHGVGFRPQKVLWQGIFCPLLADIVLIVGLIFFFF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GVIHGVGFRPQKVLWQGIFCPLLADIVLIVGLIFFFF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796