Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is citG
Identifier: 30062070
GI number: 30062070
Start: 548368
End: 549246
Strand: Reverse
Name: citG
Synonym: S0537
Alternate gene names: 30062070
Gene position: 549246-548368 (Counterclockwise)
Preceding gene: 30062071
Following gene: 30062069
Centisome position: 11.94
GC content: 55.06
Gene sequence:
>879_bases ATGTCGATGCCTGCAACGTCAACTAAAACCACAAAGCTTGCGACGTCATTAATCGATGAGTACGCCCTGCTGGGCTGGCG CGCCATGCTGACTGAAGTCAATCTGTCACCGAAACCAGGCCTCGTGGATCGCATTAACTGCGGTGCGCACAAAGATATGG CGCTGGAAGATTTCCACCGCAGCGCGCTGGCGATTCAGGGCTGGTTACCCCGTTTCATTGAATTTGGTGCCTGTAGTGCA GAAATGGCACCGGAAGCGGTACTCCACGGATTACGCCCAATTGGTATGGCTTGCGAAGGTGATATGTTCCGCGCCACTGC GGGCGTAAACACGCATAAAGGCAGCATTTTTTCTTTAGGGCTGCTATGTGCGGCAATTGGCCGTTTGCTTCAGCTCAACC AGCCGGTTACGCCAACAACCGTTTGTTCTACGGCGGCAAGTTTCTGCCGTGGCCTGACCGATCGCGAACTGCGTACCAAT AATTCACGACTGACGGCAGGTCAACGGTTGTACCAGCAGCTTGGCCTTACCGGCGCACGCGGTGAAGCCGAAGCAGGTTA TCCACTGGTGATCAACCACGCCTTGCCGCATTACCTCACTCTGCTGGATCAGGGGTTAGATCCTGAACTGGCATTGCTCG ATACCTTGCTCCTACTGATGGCTACCAACGGCGATACCAACGTTGCATCGCGCGGTGGCGAGGGGGGCCTGCGCTGGCTA CAGCGCGAGGCGCAAACATTATTGCAAAAAGGGGGCATTCGAACCCCCACCGATCTCGATTATCTCCGGCAGTTCGACAG GGAGTGTATCGAACGAAATCTCAGTCCAGGCGGCAGTGCCGACCTGCTGATCCTTACCTGTTTTTTAGCACAGATTTAA
Upstream 100 bases:
>100_bases CGCCGCTGCCTGTTGTGCGAGCAAAGCGCAGCCGTCTGCGCGCGTGGAAAAACCCATCAACTGACCGATTTACTCAACCG CATGGAGGCACTGCTGAACG
Downstream 100 bases:
>100_bases TTATTTAAGCACTTGATAAATTTGGAAATATTAATTTTCGGAGAACCCGTATGTCTTTAGCAAAAGATAATATATGGAAA CTATTGGCCCCACTGGTGGT
Product: triphosphoribosyl-dephospho-CoA synthase
Products: NA
Alternate protein names: 2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSA EMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTN NSRLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMATNGDTNVASRGGEGGLRWL QREAQTLLQKGGIRTPTDLDYLRQFDRECIERNLSPGGSADLLILTCFLAQI
Sequences:
>Translated_292_residues MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSA EMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTN NSRLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMATNGDTNVASRGGEGGLRWL QREAQTLLQKGGIRTPTDLDYLRQFDRECIERNLSPGGSADLLILTCFLAQI >Mature_291_residues SMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAE MAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTNN SRLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMATNGDTNVASRGGEGGLRWLQ REAQTLLQKGGIRTPTDLDYLRQFDRECIERNLSPGGSADLLILTCFLAQI
Specific function: Catalyzes the formation of 2-(5''-triphosphoribosyl)-3'- dephosphocoenzyme-A, the precursor of the prosthetic group of the holo-acyl carrier protein (gamma chain) of citrate lyase, from ATP and dephospho-CoA [H]
COG id: COG1767
COG function: function code H; Triphosphoribosyl-dephospho-CoA synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitG/MdcB family [H]
Homologues:
Organism=Escherichia coli, GI1786830, Length=292, Percent_Identity=98.6301369863014, Blast_Score=584, Evalue=1e-168,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002736 - InterPro: IPR017551 [H]
Pfam domain/function: PF01874 CitG [H]
EC number: =2.7.8.25 [H]
Molecular weight: Translated: 31608; Mature: 31477
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH SALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLG HHHHHHHHHHHHHHHCCCCHHCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHH LLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTNNSRLTAGQRLYQQLGLTGAR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCC GEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMATNGDTNVASRGGEGGLRWL CCCCCCCCEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHH QREAQTLLQKGGIRTPTDLDYLRQFDRECIERNLSPGGSADLLILTCFLAQI HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure SMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH SALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLG HHHHHHHHHHHHHHHCCCCHHCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHH LLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTNNSRLTAGQRLYQQLGLTGAR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCC GEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMATNGDTNVASRGGEGGLRWL CCCCCCCCEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHH QREAQTLLQKGGIRTPTDLDYLRQFDRECIERNLSPGGSADLLILTCFLAQI HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA