Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is ybaM
Identifier: 30061966
GI number: 30061966
Start: 426442
End: 426603
Strand: Reverse
Name: ybaM
Synonym: S0418
Alternate gene names: 30061966
Gene position: 426603-426442 (Counterclockwise)
Preceding gene: 30061967
Following gene: 30061963
Centisome position: 9.28
GC content: 46.91
Gene sequence:
>162_bases ATGTCACTTGAAAATGCCCCTGACGATGTCAAACTGGCTGTCGATTTGATTGTGCTGCTGGAGGAAAATCAGATCCCTGC CAGTACCGTGCTGCGCGCGCTGGATATTGTAAAGCGTGATTATGAAAAGAAATTAACGCACGATGATGAGGCGGAAAAGT GA
Upstream 100 bases:
>100_bases GAAGTGAAAGCCTATGAAGCGCGCCTGGCACGCTGCCGCCATGCGCTGGAAAAAATCGAAAACAGGCTAGCGCGCTTAAC CCGCTAGCAATGGAAAGAGT
Downstream 100 bases:
>100_bases GAAATAAATGGGGCCGCTAAATGTCCCCTAAGATTGCGGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCT ACACCGCTCCTGCAATATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 52
Protein sequence:
>53_residues MSLENAPDDVKLAVDLIVLLEENQIPASTVLRALDIVKRDYEKKLTHDDEAEK
Sequences:
>Translated_53_residues MSLENAPDDVKLAVDLIVLLEENQIPASTVLRALDIVKRDYEKKLTHDDEAEK >Mature_52_residues SLENAPDDVKLAVDLIVLLEENQIPASTVLRALDIVKRDYEKKLTHDDEAEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786672, Length=53, Percent_Identity=98.1132075471698, Blast_Score=101, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019630 [H]
Pfam domain/function: PF10689 DUF2496 [H]
EC number: NA
Molecular weight: Translated: 6006; Mature: 5875
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLENAPDDVKLAVDLIVLLEENQIPASTVLRALDIVKRDYEKKLTHDDEAEK CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLENAPDDVKLAVDLIVLLEENQIPASTVLRALDIVKRDYEKKLTHDDEAEK CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1856227; 9278503; 7567469 [H]