Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

Click here to switch to the map view.

The map label for this gene is 30061921

Identifier: 30061921

GI number: 30061921

Start: 373741

End: 375471

Strand: Reverse

Name: 30061921

Synonym: S4809

Alternate gene names: NA

Gene position: 375471-373741 (Counterclockwise)

Preceding gene: 30061922

Following gene: 30061919

Centisome position: 8.16

GC content: 35.93

Gene sequence:

>1731_bases
ATGAAAGCGAAATCTACTTTGTTATTAATGATTTTATCTGTTTTTTATTCTCATCAGGTTTTATCCAGCGAACCCACTCA
GCCGGATGTTTATTCTGTCGTCGAGAAAAAACTAAACTCTGCTTTACCTCTGGAAGAAAATACCACCTTCAGATCGCAGG
CTGAATGGTTTAATTTGCAATATGAATTATTAGTATCTGGCTACCCTGAACGTGCTTACAATTTACTGAGCAAACTTGAG
ACAGAATCGAAAAACGCTAAATATTATCTGGATTTAACTGCCTCCAGAGTCGCTGAAGAAGAAGCACCAGAGACAGCCTT
AACTTTTTTATCAAAAATTGGGTTAAATAAACCGGCTACTCTTACATCCTTTGAGAGCTATATCAATAGCTGGATAAAAA
GCAAACAACCCGAAAAGGCTATGCAGCTTCTCAGCCTCGATGAGAATGCCCTGAATTATTATTTACCGACTGTGTTAGTC
GCATATCAGATCGTTCCTGATAAGGCAATAAGTATTTATAATTCTGTATATGGAGATAATGTTGTTATACCCTATCAGCA
AGTCACCATGTTACTTACAGTTGCGGAGGGTTATCAAACAAAAGGCGATATAAAAAACGCCATTCATTATGCCGATAAGG
CGCTGAATATGTTTGATAAAGCTATTGCTGTAGATAGCAGTCGTGAATCCCATTATAGTGATGAGTATTTGAAACTCATG
AATATCTACGCCGCCAATGGCAACAAAGAAAAAGCGGTGGTTTTATCTCAACGTCTACACAAAGCCATTACCGAATCTCA
ATCGAATTACTTAAGTACTCTGGAAGGAATTTTATTGTTTTATAGAAATAATGATATGCAGCAAGACTATCAAAACAGCC
TTTCAAATTACATAGTATTTATCGATAAAATTTTTGCCTTTTCCCCATCAACAAGAAGTGAATTAAGCCTCATTAATTTA
TTAAATTCATTAAATGAGGTGGAATTGATGAGAAAACGTCTGGCGTTTCTGATGACAGCACCAGAATACGCTTGTTATAA
TAGTCAGTATTGTTATGAAGACAAAGTCAGCGCATTAAAAATCCTGTATCGTCATCATGACAATGAGCTAATGGACAAAT
ATTTCACGACTCTTCTTAAAGAGATCAGTAATCAACCATTAGAAGACTGGGATATAATAATAAGTAATACTGGTGAAAAA
TTTAGTGAAGTGGGTCTAACCAAATATGCTCAACATCTCGCATCTTTCGCTGAAGAATTTTATATAAAAGAGCAAAAATC
ACATTCTGAAAGTGAAATGAGAGGACTATTTTCATCACTTGCCGAATTATATAGTTTTGGTAATGATACTGCCAGCGCAA
ACCGAGTGTTCCATCAGCATGTCCCTGCCTTCAATACAGATCATATGATTCAATATTTTATAAATGCCAAAGAATGGAAC
AATGCCAGGGAATTATTGATAAAAGAGGAAATGTTGGGTATGCATAATCTGATATTGTTGGAGAATATTTGTATGCAAAA
AAATGCAGAATGCATGGCACACATTACCTTTACGCTTAATAAATTAACAACACAACCAGCAATAACAAAAATAGATAGCG
TGGGTAATGAGCAACTTTATCAGATTGGCAAAATCTACCATAAGTTGGAAATTAAACCTGAGCCAGAGCAACAGGTTTTA
ATTCAGTCGCTTTATGACCGGGCATCAGGAAGCGCCTCTGCAACTCAATAA

Upstream 100 bases:

>100_bases
GAACCTGCGCTTAAAGCATTAAATGAACTTGAACATCAAACAAAATAAAGCGCTCAGGGACCACGTAAGGTTCATCAAAC
AGAAAAGGATATAGTTTGCG

Downstream 100 bases:

>100_bases
ATGCATGGTCAAAAGGGCCACCACGGTGGCCCTGACAATCAGTAGCTATATCCAGAAAGTTAATCGCGGAAGTTTTTGAA
CTGGAACGGCTGACCGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 576; Mature: 576

Protein sequence:

>576_residues
MKAKSTLLLMILSVFYSHQVLSSEPTQPDVYSVVEKKLNSALPLEENTTFRSQAEWFNLQYELLVSGYPERAYNLLSKLE
TESKNAKYYLDLTASRVAEEEAPETALTFLSKIGLNKPATLTSFESYINSWIKSKQPEKAMQLLSLDENALNYYLPTVLV
AYQIVPDKAISIYNSVYGDNVVIPYQQVTMLLTVAEGYQTKGDIKNAIHYADKALNMFDKAIAVDSSRESHYSDEYLKLM
NIYAANGNKEKAVVLSQRLHKAITESQSNYLSTLEGILLFYRNNDMQQDYQNSLSNYIVFIDKIFAFSPSTRSELSLINL
LNSLNEVELMRKRLAFLMTAPEYACYNSQYCYEDKVSALKILYRHHDNELMDKYFTTLLKEISNQPLEDWDIIISNTGEK
FSEVGLTKYAQHLASFAEEFYIKEQKSHSESEMRGLFSSLAELYSFGNDTASANRVFHQHVPAFNTDHMIQYFINAKEWN
NARELLIKEEMLGMHNLILLENICMQKNAECMAHITFTLNKLTTQPAITKIDSVGNEQLYQIGKIYHKLEIKPEPEQQVL
IQSLYDRASGSASATQ

Sequences:

>Translated_576_residues
MKAKSTLLLMILSVFYSHQVLSSEPTQPDVYSVVEKKLNSALPLEENTTFRSQAEWFNLQYELLVSGYPERAYNLLSKLE
TESKNAKYYLDLTASRVAEEEAPETALTFLSKIGLNKPATLTSFESYINSWIKSKQPEKAMQLLSLDENALNYYLPTVLV
AYQIVPDKAISIYNSVYGDNVVIPYQQVTMLLTVAEGYQTKGDIKNAIHYADKALNMFDKAIAVDSSRESHYSDEYLKLM
NIYAANGNKEKAVVLSQRLHKAITESQSNYLSTLEGILLFYRNNDMQQDYQNSLSNYIVFIDKIFAFSPSTRSELSLINL
LNSLNEVELMRKRLAFLMTAPEYACYNSQYCYEDKVSALKILYRHHDNELMDKYFTTLLKEISNQPLEDWDIIISNTGEK
FSEVGLTKYAQHLASFAEEFYIKEQKSHSESEMRGLFSSLAELYSFGNDTASANRVFHQHVPAFNTDHMIQYFINAKEWN
NARELLIKEEMLGMHNLILLENICMQKNAECMAHITFTLNKLTTQPAITKIDSVGNEQLYQIGKIYHKLEIKPEPEQQVL
IQSLYDRASGSASATQ
>Mature_576_residues
MKAKSTLLLMILSVFYSHQVLSSEPTQPDVYSVVEKKLNSALPLEENTTFRSQAEWFNLQYELLVSGYPERAYNLLSKLE
TESKNAKYYLDLTASRVAEEEAPETALTFLSKIGLNKPATLTSFESYINSWIKSKQPEKAMQLLSLDENALNYYLPTVLV
AYQIVPDKAISIYNSVYGDNVVIPYQQVTMLLTVAEGYQTKGDIKNAIHYADKALNMFDKAIAVDSSRESHYSDEYLKLM
NIYAANGNKEKAVVLSQRLHKAITESQSNYLSTLEGILLFYRNNDMQQDYQNSLSNYIVFIDKIFAFSPSTRSELSLINL
LNSLNEVELMRKRLAFLMTAPEYACYNSQYCYEDKVSALKILYRHHDNELMDKYFTTLLKEISNQPLEDWDIIISNTGEK
FSEVGLTKYAQHLASFAEEFYIKEQKSHSESEMRGLFSSLAELYSFGNDTASANRVFHQHVPAFNTDHMIQYFINAKEWN
NARELLIKEEMLGMHNLILLENICMQKNAECMAHITFTLNKLTTQPAITKIDSVGNEQLYQIGKIYHKLEIKPEPEQQVL
IQSLYDRASGSASATQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65983; Mature: 65983

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKSTLLLMILSVFYSHQVLSSEPTQPDVYSVVEKKLNSALPLEENTTFRSQAEWFNLQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCE
YELLVSGYPERAYNLLSKLETESKNAKYYLDLTASRVAEEEAPETALTFLSKIGLNKPAT
EEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCH
LTSFESYINSWIKSKQPEKAMQLLSLDENALNYYLPTVLVAYQIVPDKAISIYNSVYGDN
HHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
VVIPYQQVTMLLTVAEGYQTKGDIKNAIHYADKALNMFDKAIAVDSSRESHYSDEYLKLM
EEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
NIYAANGNKEKAVVLSQRLHKAITESQSNYLSTLEGILLFYRNNDMQQDYQNSLSNYIVF
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHH
IDKIFAFSPSTRSELSLINLLNSLNEVELMRKRLAFLMTAPEYACYNSQYCYEDKVSALK
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHH
ILYRHHDNELMDKYFTTLLKEISNQPLEDWDIIISNTGEKFSEVGLTKYAQHLASFAEEF
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHH
YIKEQKSHSESEMRGLFSSLAELYSFGNDTASANRVFHQHVPAFNTDHMIQYFINAKEWN
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCHHHCC
NARELLIKEEMLGMHNLILLENICMQKNAECMAHITFTLNKLTTQPAITKIDSVGNEQLY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCHHHHHHHCCCHHHHH
QIGKIYHKLEIKPEPEQQVLIQSLYDRASGSASATQ
HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKAKSTLLLMILSVFYSHQVLSSEPTQPDVYSVVEKKLNSALPLEENTTFRSQAEWFNLQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCE
YELLVSGYPERAYNLLSKLETESKNAKYYLDLTASRVAEEEAPETALTFLSKIGLNKPAT
EEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCH
LTSFESYINSWIKSKQPEKAMQLLSLDENALNYYLPTVLVAYQIVPDKAISIYNSVYGDN
HHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
VVIPYQQVTMLLTVAEGYQTKGDIKNAIHYADKALNMFDKAIAVDSSRESHYSDEYLKLM
EEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
NIYAANGNKEKAVVLSQRLHKAITESQSNYLSTLEGILLFYRNNDMQQDYQNSLSNYIVF
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHH
IDKIFAFSPSTRSELSLINLLNSLNEVELMRKRLAFLMTAPEYACYNSQYCYEDKVSALK
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHH
ILYRHHDNELMDKYFTTLLKEISNQPLEDWDIIISNTGEKFSEVGLTKYAQHLASFAEEF
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHH
YIKEQKSHSESEMRGLFSSLAELYSFGNDTASANRVFHQHVPAFNTDHMIQYFINAKEWN
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCHHHCC
NARELLIKEEMLGMHNLILLENICMQKNAECMAHITFTLNKLTTQPAITKIDSVGNEQLY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCHHHHHHHCCCHHHHH
QIGKIYHKLEIKPEPEQQVLIQSLYDRASGSASATQ
HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA