| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30061921
Identifier: 30061921
GI number: 30061921
Start: 373741
End: 375471
Strand: Reverse
Name: 30061921
Synonym: S4809
Alternate gene names: NA
Gene position: 375471-373741 (Counterclockwise)
Preceding gene: 30061922
Following gene: 30061919
Centisome position: 8.16
GC content: 35.93
Gene sequence:
>1731_bases ATGAAAGCGAAATCTACTTTGTTATTAATGATTTTATCTGTTTTTTATTCTCATCAGGTTTTATCCAGCGAACCCACTCA GCCGGATGTTTATTCTGTCGTCGAGAAAAAACTAAACTCTGCTTTACCTCTGGAAGAAAATACCACCTTCAGATCGCAGG CTGAATGGTTTAATTTGCAATATGAATTATTAGTATCTGGCTACCCTGAACGTGCTTACAATTTACTGAGCAAACTTGAG ACAGAATCGAAAAACGCTAAATATTATCTGGATTTAACTGCCTCCAGAGTCGCTGAAGAAGAAGCACCAGAGACAGCCTT AACTTTTTTATCAAAAATTGGGTTAAATAAACCGGCTACTCTTACATCCTTTGAGAGCTATATCAATAGCTGGATAAAAA GCAAACAACCCGAAAAGGCTATGCAGCTTCTCAGCCTCGATGAGAATGCCCTGAATTATTATTTACCGACTGTGTTAGTC GCATATCAGATCGTTCCTGATAAGGCAATAAGTATTTATAATTCTGTATATGGAGATAATGTTGTTATACCCTATCAGCA AGTCACCATGTTACTTACAGTTGCGGAGGGTTATCAAACAAAAGGCGATATAAAAAACGCCATTCATTATGCCGATAAGG CGCTGAATATGTTTGATAAAGCTATTGCTGTAGATAGCAGTCGTGAATCCCATTATAGTGATGAGTATTTGAAACTCATG AATATCTACGCCGCCAATGGCAACAAAGAAAAAGCGGTGGTTTTATCTCAACGTCTACACAAAGCCATTACCGAATCTCA ATCGAATTACTTAAGTACTCTGGAAGGAATTTTATTGTTTTATAGAAATAATGATATGCAGCAAGACTATCAAAACAGCC TTTCAAATTACATAGTATTTATCGATAAAATTTTTGCCTTTTCCCCATCAACAAGAAGTGAATTAAGCCTCATTAATTTA TTAAATTCATTAAATGAGGTGGAATTGATGAGAAAACGTCTGGCGTTTCTGATGACAGCACCAGAATACGCTTGTTATAA TAGTCAGTATTGTTATGAAGACAAAGTCAGCGCATTAAAAATCCTGTATCGTCATCATGACAATGAGCTAATGGACAAAT ATTTCACGACTCTTCTTAAAGAGATCAGTAATCAACCATTAGAAGACTGGGATATAATAATAAGTAATACTGGTGAAAAA TTTAGTGAAGTGGGTCTAACCAAATATGCTCAACATCTCGCATCTTTCGCTGAAGAATTTTATATAAAAGAGCAAAAATC ACATTCTGAAAGTGAAATGAGAGGACTATTTTCATCACTTGCCGAATTATATAGTTTTGGTAATGATACTGCCAGCGCAA ACCGAGTGTTCCATCAGCATGTCCCTGCCTTCAATACAGATCATATGATTCAATATTTTATAAATGCCAAAGAATGGAAC AATGCCAGGGAATTATTGATAAAAGAGGAAATGTTGGGTATGCATAATCTGATATTGTTGGAGAATATTTGTATGCAAAA AAATGCAGAATGCATGGCACACATTACCTTTACGCTTAATAAATTAACAACACAACCAGCAATAACAAAAATAGATAGCG TGGGTAATGAGCAACTTTATCAGATTGGCAAAATCTACCATAAGTTGGAAATTAAACCTGAGCCAGAGCAACAGGTTTTA ATTCAGTCGCTTTATGACCGGGCATCAGGAAGCGCCTCTGCAACTCAATAA
Upstream 100 bases:
>100_bases GAACCTGCGCTTAAAGCATTAAATGAACTTGAACATCAAACAAAATAAAGCGCTCAGGGACCACGTAAGGTTCATCAAAC AGAAAAGGATATAGTTTGCG
Downstream 100 bases:
>100_bases ATGCATGGTCAAAAGGGCCACCACGGTGGCCCTGACAATCAGTAGCTATATCCAGAAAGTTAATCGCGGAAGTTTTTGAA CTGGAACGGCTGACCGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 576; Mature: 576
Protein sequence:
>576_residues MKAKSTLLLMILSVFYSHQVLSSEPTQPDVYSVVEKKLNSALPLEENTTFRSQAEWFNLQYELLVSGYPERAYNLLSKLE TESKNAKYYLDLTASRVAEEEAPETALTFLSKIGLNKPATLTSFESYINSWIKSKQPEKAMQLLSLDENALNYYLPTVLV AYQIVPDKAISIYNSVYGDNVVIPYQQVTMLLTVAEGYQTKGDIKNAIHYADKALNMFDKAIAVDSSRESHYSDEYLKLM NIYAANGNKEKAVVLSQRLHKAITESQSNYLSTLEGILLFYRNNDMQQDYQNSLSNYIVFIDKIFAFSPSTRSELSLINL LNSLNEVELMRKRLAFLMTAPEYACYNSQYCYEDKVSALKILYRHHDNELMDKYFTTLLKEISNQPLEDWDIIISNTGEK FSEVGLTKYAQHLASFAEEFYIKEQKSHSESEMRGLFSSLAELYSFGNDTASANRVFHQHVPAFNTDHMIQYFINAKEWN NARELLIKEEMLGMHNLILLENICMQKNAECMAHITFTLNKLTTQPAITKIDSVGNEQLYQIGKIYHKLEIKPEPEQQVL IQSLYDRASGSASATQ
Sequences:
>Translated_576_residues MKAKSTLLLMILSVFYSHQVLSSEPTQPDVYSVVEKKLNSALPLEENTTFRSQAEWFNLQYELLVSGYPERAYNLLSKLE TESKNAKYYLDLTASRVAEEEAPETALTFLSKIGLNKPATLTSFESYINSWIKSKQPEKAMQLLSLDENALNYYLPTVLV AYQIVPDKAISIYNSVYGDNVVIPYQQVTMLLTVAEGYQTKGDIKNAIHYADKALNMFDKAIAVDSSRESHYSDEYLKLM NIYAANGNKEKAVVLSQRLHKAITESQSNYLSTLEGILLFYRNNDMQQDYQNSLSNYIVFIDKIFAFSPSTRSELSLINL LNSLNEVELMRKRLAFLMTAPEYACYNSQYCYEDKVSALKILYRHHDNELMDKYFTTLLKEISNQPLEDWDIIISNTGEK FSEVGLTKYAQHLASFAEEFYIKEQKSHSESEMRGLFSSLAELYSFGNDTASANRVFHQHVPAFNTDHMIQYFINAKEWN NARELLIKEEMLGMHNLILLENICMQKNAECMAHITFTLNKLTTQPAITKIDSVGNEQLYQIGKIYHKLEIKPEPEQQVL IQSLYDRASGSASATQ >Mature_576_residues MKAKSTLLLMILSVFYSHQVLSSEPTQPDVYSVVEKKLNSALPLEENTTFRSQAEWFNLQYELLVSGYPERAYNLLSKLE TESKNAKYYLDLTASRVAEEEAPETALTFLSKIGLNKPATLTSFESYINSWIKSKQPEKAMQLLSLDENALNYYLPTVLV AYQIVPDKAISIYNSVYGDNVVIPYQQVTMLLTVAEGYQTKGDIKNAIHYADKALNMFDKAIAVDSSRESHYSDEYLKLM NIYAANGNKEKAVVLSQRLHKAITESQSNYLSTLEGILLFYRNNDMQQDYQNSLSNYIVFIDKIFAFSPSTRSELSLINL LNSLNEVELMRKRLAFLMTAPEYACYNSQYCYEDKVSALKILYRHHDNELMDKYFTTLLKEISNQPLEDWDIIISNTGEK FSEVGLTKYAQHLASFAEEFYIKEQKSHSESEMRGLFSSLAELYSFGNDTASANRVFHQHVPAFNTDHMIQYFINAKEWN NARELLIKEEMLGMHNLILLENICMQKNAECMAHITFTLNKLTTQPAITKIDSVGNEQLYQIGKIYHKLEIKPEPEQQVL IQSLYDRASGSASATQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65983; Mature: 65983
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKSTLLLMILSVFYSHQVLSSEPTQPDVYSVVEKKLNSALPLEENTTFRSQAEWFNLQ CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCE YELLVSGYPERAYNLLSKLETESKNAKYYLDLTASRVAEEEAPETALTFLSKIGLNKPAT EEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCH LTSFESYINSWIKSKQPEKAMQLLSLDENALNYYLPTVLVAYQIVPDKAISIYNSVYGDN HHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC VVIPYQQVTMLLTVAEGYQTKGDIKNAIHYADKALNMFDKAIAVDSSRESHYSDEYLKLM EEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH NIYAANGNKEKAVVLSQRLHKAITESQSNYLSTLEGILLFYRNNDMQQDYQNSLSNYIVF HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHH IDKIFAFSPSTRSELSLINLLNSLNEVELMRKRLAFLMTAPEYACYNSQYCYEDKVSALK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHH ILYRHHDNELMDKYFTTLLKEISNQPLEDWDIIISNTGEKFSEVGLTKYAQHLASFAEEF HHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHH YIKEQKSHSESEMRGLFSSLAELYSFGNDTASANRVFHQHVPAFNTDHMIQYFINAKEWN HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCHHHCC NARELLIKEEMLGMHNLILLENICMQKNAECMAHITFTLNKLTTQPAITKIDSVGNEQLY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCHHHHHHHCCCHHHHH QIGKIYHKLEIKPEPEQQVLIQSLYDRASGSASATQ HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKAKSTLLLMILSVFYSHQVLSSEPTQPDVYSVVEKKLNSALPLEENTTFRSQAEWFNLQ CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCE YELLVSGYPERAYNLLSKLETESKNAKYYLDLTASRVAEEEAPETALTFLSKIGLNKPAT EEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCH LTSFESYINSWIKSKQPEKAMQLLSLDENALNYYLPTVLVAYQIVPDKAISIYNSVYGDN HHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC VVIPYQQVTMLLTVAEGYQTKGDIKNAIHYADKALNMFDKAIAVDSSRESHYSDEYLKLM EEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH NIYAANGNKEKAVVLSQRLHKAITESQSNYLSTLEGILLFYRNNDMQQDYQNSLSNYIVF HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHH IDKIFAFSPSTRSELSLINLLNSLNEVELMRKRLAFLMTAPEYACYNSQYCYEDKVSALK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHH ILYRHHDNELMDKYFTTLLKEISNQPLEDWDIIISNTGEKFSEVGLTKYAQHLASFAEEF HHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHH YIKEQKSHSESEMRGLFSSLAELYSFGNDTASANRVFHQHVPAFNTDHMIQYFINAKEWN HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCHHHCC NARELLIKEEMLGMHNLILLENICMQKNAECMAHITFTLNKLTTQPAITKIDSVGNEQLY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCHHHHHHHCCCHHHHH QIGKIYHKLEIKPEPEQQVLIQSLYDRASGSASATQ HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA