Click here to switch to the map view.

The map label for this gene is gtrAI

Identifier: 30061872

GI number: 30061872

Start: 323692

End: 324054

Strand: Reverse

Name: gtrAI

Synonym: S0321

Alternate gene names: 30061872

Gene position: 324054-323692 (Counterclockwise)

Preceding gene: 30061873

Following gene: 30061871

Centisome position: 7.05

GC content: 42.7

Gene sequence:

>363_bases
ATGTTAAAGTTATTTGTAAAGTACACATCTATAGGTGTGCTGAACACACTTATACACTGGGTGGTTTTTGGTGTATGTAT
CTATGCCGCACATACCAGTCAGGCTCTGGCAAACTTCACAGGTTTCGTAGTGGCTGTGAGCTTTAGCTTCTTCGCGAATG
CAAGATTCACATTCAAAGCATTGACTACAGCGATGCGCTACATGTTATACGTGGGATTTATGGGAATATTGAGTGTGATT
GTTGGTTGGGCAGCTGATAAATGCTCACTTCCTCCAATAGTCACTCTTATCACCTTCTCCGCCATCAGTCTGGTGTGCGG
TTTCGTCTATTCAAAGTTCATTGTCTTTAGGGATGCGAAATGA

Upstream 100 bases:

>100_bases
CTTATGTGTCTCAGTTTTGTCTCATCAGACATAGCAAGTATCGATCAATTGAGACTTGGATGATAGACTTCATGCCTTTC
AGAGCTCATTGATTAAATAA

Downstream 100 bases:

>100_bases
AAATATCTCTTGTCGTTCCTGTCTTCAATGAAGAAGAAGCGATACCTGTTTTCTATAAAACGGTACGTGAATTCCAAGAG
TTGAAGCCATATGAAGTAGA

Product: putative flippase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MLKLFVKYTSIGVLNTLIHWVVFGVCIYAAHTSQALANFTGFVVAVSFSFFANARFTFKALTTAMRYMLYVGFMGILSVI
VGWAADKCSLPPIVTLITFSAISLVCGFVYSKFIVFRDAK

Sequences:

>Translated_120_residues
MLKLFVKYTSIGVLNTLIHWVVFGVCIYAAHTSQALANFTGFVVAVSFSFFANARFTFKALTTAMRYMLYVGFMGILSVI
VGWAADKCSLPPIVTLITFSAISLVCGFVYSKFIVFRDAK
>Mature_120_residues
MLKLFVKYTSIGVLNTLIHWVVFGVCIYAAHTSQALANFTGFVVAVSFSFFANARFTFKALTTAMRYMLYVGFMGILSVI
VGWAADKCSLPPIVTLITFSAISLVCGFVYSKFIVFRDAK

Specific function: Involved in O antigen modification. Involved in the translocation of bactoprenol-linked glucose across the cytoplasmic membrane [H]

COG id: COG2246

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gtrA family [H]

Homologues:

Organism=Escherichia coli, GI1788691, Length=120, Percent_Identity=87.5, Blast_Score=218, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016480
- InterPro:   IPR007267 [H]

Pfam domain/function: PF04138 GtrA [H]

EC number: NA

Molecular weight: Translated: 13275; Mature: 13275

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLFVKYTSIGVLNTLIHWVVFGVCIYAAHTSQALANFTGFVVAVSFSFFANARFTFKA
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LTTAMRYMLYVGFMGILSVIVGWAADKCSLPPIVTLITFSAISLVCGFVYSKFIVFRDAK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKLFVKYTSIGVLNTLIHWVVFGVCIYAAHTSQALANFTGFVVAVSFSFFANARFTFKA
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LTTAMRYMLYVGFMGILSVIVGWAADKCSLPPIVTLITFSAISLVCGFVYSKFIVFRDAK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]