| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30061868
Identifier: 30061868
GI number: 30061868
Start: 318229
End: 319278
Strand: Reverse
Name: 30061868
Synonym: S4802
Alternate gene names: NA
Gene position: 319278-318229 (Counterclockwise)
Preceding gene: 30061870
Following gene: 30061863
Centisome position: 6.94
GC content: 31.62
Gene sequence:
>1050_bases ATGTATAATAACAAAATCGACAGCAACAGAAAAATAAGACATGATTGGGTTGATGCTTTAAAATTTCTCGGTATTTTTGC TATATATTTAGGTCACCTTGGGTTGGGGGCTGGCAAATTGTATCCTTTTGTTTTTAGTTATCACGTCCCACTATTCTTTT TCGCTGCTGGTTTTTTTACTATCAAAAAAAATGACTTATCTGTTTTCGATTATATCAAGTCAAAGTTTTACAGATTAATG ATTCCATATTTCACTTTTGCATTTTCTATATTAATAATAAACACAATTAACTCAGGTGAGACGATTGATTATATATACAA CCACATTTATGATATAATATATGGTGTTAGAAATAACCAATTCGTAGGAACAATATGGTTTATAAACTGCCTTTTTGTTA TAATAGCAATTGATGCAATCTTTAGAGAAATAGTCAAGAACAATATAGTGATTTTAATCATATCACTGTTATCGTTCATG TTGTCACAAACAGTGCTCAATCATAACCCATTACTAGATCCTCAATGGTTTTGGAACATAGACTCCGCTATGGCATACTG GTGGTTATTGCCTCTCGGTAGATGTATGTTTTTAGAATTAACACGTGACAGGTTTTTTGGAAAATCTAAAATTGGTTTCA TTGTCTTCTCAATTACCGCTATAATGAGTGCGTATCAACTACTTAACCAGAAACCTTTACTTTTTAAGATTATCTCAATA TTCAATGCAGACATAATATCAAGTAGTTATATTCAAGCTATTAATACTATTATCACCACGGTAGGCTTGATAATCTTTAA TATTTTCATAGCAAAAATAATTTGTGGAAATGACTTTATTGTAAGAGCTGGAAGAAATACTCTTAACATATGTGGAATGG AGTATATCACCAAATTATTTATCCCTATGGCTTTAGCAATTATAGGCTTCAGCGTGACTATTCCAAATCCTATCTGCGCA ATCATATATACCTGTATTTGTGTATATGTATCAGATAAAATTGGCCATTGGCTATCGAGGACAGTCGGTGGGCCATTTTT GATAAAATGA
Upstream 100 bases:
>100_bases AATTAATATTGAACTCGTTGATTAATAATCATAAACTTTCAGGCATTCATATTTGCAATGAGTGTTTAAAAATCACACAA AACTGGAGAGCCTACTTTAA
Downstream 100 bases:
>100_bases TAAAAAGGCGCAATTAATTGCGCCTTTTTATAGATATATAGCGCATATTTATGCTCAGATTATACTGTTAAAATTAATGC GCAAATGTTACGGTTTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MYNNKIDSNRKIRHDWVDALKFLGIFAIYLGHLGLGAGKLYPFVFSYHVPLFFFAAGFFTIKKNDLSVFDYIKSKFYRLM IPYFTFAFSILIINTINSGETIDYIYNHIYDIIYGVRNNQFVGTIWFINCLFVIIAIDAIFREIVKNNIVILIISLLSFM LSQTVLNHNPLLDPQWFWNIDSAMAYWWLLPLGRCMFLELTRDRFFGKSKIGFIVFSITAIMSAYQLLNQKPLLFKIISI FNADIISSSYIQAINTIITTVGLIIFNIFIAKIICGNDFIVRAGRNTLNICGMEYITKLFIPMALAIIGFSVTIPNPICA IIYTCICVYVSDKIGHWLSRTVGGPFLIK
Sequences:
>Translated_349_residues MYNNKIDSNRKIRHDWVDALKFLGIFAIYLGHLGLGAGKLYPFVFSYHVPLFFFAAGFFTIKKNDLSVFDYIKSKFYRLM IPYFTFAFSILIINTINSGETIDYIYNHIYDIIYGVRNNQFVGTIWFINCLFVIIAIDAIFREIVKNNIVILIISLLSFM LSQTVLNHNPLLDPQWFWNIDSAMAYWWLLPLGRCMFLELTRDRFFGKSKIGFIVFSITAIMSAYQLLNQKPLLFKIISI FNADIISSSYIQAINTIITTVGLIIFNIFIAKIICGNDFIVRAGRNTLNICGMEYITKLFIPMALAIIGFSVTIPNPICA IIYTCICVYVSDKIGHWLSRTVGGPFLIK >Mature_349_residues MYNNKIDSNRKIRHDWVDALKFLGIFAIYLGHLGLGAGKLYPFVFSYHVPLFFFAAGFFTIKKNDLSVFDYIKSKFYRLM IPYFTFAFSILIINTINSGETIDYIYNHIYDIIYGVRNNQFVGTIWFINCLFVIIAIDAIFREIVKNNIVILIISLLSFM LSQTVLNHNPLLDPQWFWNIDSAMAYWWLLPLGRCMFLELTRDRFFGKSKIGFIVFSITAIMSAYQLLNQKPLLFKIISI FNADIISSSYIQAINTIITTVGLIIFNIFIAKIICGNDFIVRAGRNTLNICGMEYITKLFIPMALAIIGFSVTIPNPICA IIYTCICVYVSDKIGHWLSRTVGGPFLIK
Specific function: Unknown
COG id: COG3594
COG function: function code G; Fucose 4-O-acetylase and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40093; Mature: 40093
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNNKIDSNRKIRHDWVDALKFLGIFAIYLGHLGLGAGKLYPFVFSYHVPLFFFAAGFFT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHE IKKNDLSVFDYIKSKFYRLMIPYFTFAFSILIINTINSGETIDYIYNHIYDIIYGVRNNQ EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCC FVGTIWFINCLFVIIAIDAIFREIVKNNIVILIISLLSFMLSQTVLNHNPLLDPQWFWNI EEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCH DSAMAYWWLLPLGRCMFLELTRDRFFGKSKIGFIVFSITAIMSAYQLLNQKPLLFKIISI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FNADIISSSYIQAINTIITTVGLIIFNIFIAKIICGNDFIVRAGRNTLNICGMEYITKLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH IPMALAIIGFSVTIPNPICAIIYTCICVYVSDKIGHWLSRTVGGPFLIK HHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure MYNNKIDSNRKIRHDWVDALKFLGIFAIYLGHLGLGAGKLYPFVFSYHVPLFFFAAGFFT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHE IKKNDLSVFDYIKSKFYRLMIPYFTFAFSILIINTINSGETIDYIYNHIYDIIYGVRNNQ EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCC FVGTIWFINCLFVIIAIDAIFREIVKNNIVILIISLLSFMLSQTVLNHNPLLDPQWFWNI EEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCH DSAMAYWWLLPLGRCMFLELTRDRFFGKSKIGFIVFSITAIMSAYQLLNQKPLLFKIISI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FNADIISSSYIQAINTIITTVGLIIFNIFIAKIICGNDFIVRAGRNTLNICGMEYITKLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH IPMALAIIGFSVTIPNPICAIIYTCICVYVSDKIGHWLSRTVGGPFLIK HHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA