Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yaiZ [H]
Identifier: 30061807
GI number: 30061807
Start: 259881
End: 260225
Strand: Reverse
Name: yaiZ [H]
Synonym: S0255
Alternate gene names: 30061807
Gene position: 260225-259881 (Counterclockwise)
Preceding gene: 30061809
Following gene: 30061805
Centisome position: 5.66
GC content: 44.35
Gene sequence:
>345_bases GTGAATCTTCGTTGTGAGTCACAAAATGGCAACCTTAAGTTAAATTTATTAATAATTACGAAAATGTTGTCTACACCACA GACGGTTGTTACAGAATATGCAAGGATGTTGTTTTTCGTTAACGGAGCTGCCATGAATCTGCCTGTAAAAATCCGCCGTG ACTGGCACTACTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGGTACTGGGATTTGAAGCAAAA GGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGA TGAAGAAACTGAAAACGCCCAATAA
Upstream 100 bases:
>100_bases CTTCTGGTGTGATACCAGCGGCTTATGGCAAGTCTGACAGGTCATTTAGATTGTCAATATCAGAATCATGGTAAATTGAT GTTGGGAATATTCCCGAAGC
Downstream 100 bases:
>100_bases GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTATCCGCAGCGTGACGCTCCAGCGCCAGCTCAAT CAAACGTGTGATCAGATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MNLRCESQNGNLKLNLLIITKMLSTPQTVVTEYARMLFFVNGAAMNLPVKIRRDWHYYAFAIGLIFILNGVVGVLGFEAK GWQTYAVGLVTWVISFWLAGLIIRRRDEETENAQ
Sequences:
>Translated_114_residues MNLRCESQNGNLKLNLLIITKMLSTPQTVVTEYARMLFFVNGAAMNLPVKIRRDWHYYAFAIGLIFILNGVVGVLGFEAK GWQTYAVGLVTWVISFWLAGLIIRRRDEETENAQ >Mature_114_residues MNLRCESQNGNLKLNLLIITKMLSTPQTVVTEYARMLFFVNGAAMNLPVKIRRDWHYYAFAIGLIFILNGVVGVLGFEAK GWQTYAVGLVTWVISFWLAGLIIRRRDEETENAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081730, Length=70, Percent_Identity=98.5714285714286, Blast_Score=144, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020490 - ProDom: PD073772 [H]
Pfam domain/function: PF10953 DUF2754 [H]
EC number: NA
Molecular weight: Translated: 13010; Mature: 13010
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRCESQNGNLKLNLLIITKMLSTPQTVVTEYARMLFFVNGAAMNLPVKIRRDWHYYAF CCCEECCCCCCEEEEEEEEEHHHCCCHHHHHHHHHHHHHCCCCEECCCEEEECCCHHHHH AIGLIFILNGVVGVLGFEAKGWQTYAVGLVTWVISFWLAGLIIRRRDEETENAQ HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNLRCESQNGNLKLNLLIITKMLSTPQTVVTEYARMLFFVNGAAMNLPVKIRRDWHYYAF CCCEECCCCCCEEEEEEEEEHHHCCCHHHHHHHHHHHHHCCCCEECCCEEEECCCHHHHH AIGLIFILNGVVGVLGFEAKGWQTYAVGLVTWVISFWLAGLIIRRRDEETENAQ HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]