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The map label for this gene is 30061772

Identifier: 30061772

GI number: 30061772

Start: 232684

End: 233178

Strand: Reverse

Name: 30061772

Synonym: S0215

Alternate gene names: NA

Gene position: 233178-232684 (Counterclockwise)

Preceding gene: 30061773

Following gene: 30061771

Centisome position: 5.07

GC content: 55.76

Gene sequence:

>495_bases
GTGAGCGCTTCCCGCCAGCGTCCAGGCAATCACCTGCTGCCCACGCTGTTTGACCGCCTGTGTGACGACGCCCCAAACCA
GAAACGCGACCACGGTATCAGCGTCAGTCCGGTTCAGATTAAGGAGATCATCCGCCGGGATTTGTCATTTCTGCTCAACA
CCGTCAGCCATGAAGATGATATTGATGCTGCACGTTATCCGTACGCGGCAGCGTCCGTACTTAACTACGGCCTGCCGCCA
CTGGCGGGCAGCTTTCTGTATGAGCACAAGTGGGACGATATCCGCAGGGCCATTTTGCGAACCATCACCCGGTTTGAACC
CCGGCTGAAAGCGTCCACTCTGCAAATCATCCCACTTCAGGATGAGCGCCGCCAGAGTGGCCATAACACATTACAGTTTG
AAATTCGCGGCGAGATCCTCACGCAGCCGTATCCGACTGCATTCCGGGTACGTAGCGCGCTGGATATGGAGCAGAGTCGC
ATTACGTTTTTTTAA

Upstream 100 bases:

>100_bases
TACAGGCGCTGGGTCAGAGGGTGTGGCTCACCGGTCACGGCGATATCAGCCTGCTGGATTTGTCCACCTGTACCTTTAAC
ACCGCTGAAGGAAGCGACGC

Downstream 100 bases:

>100_bases
TTCAGAGAGAGACCGATGGATCCACGGCTACTGGAATACTACAACCGCGAACTGAGCTATCTGCGGGAAACGGGAGCCGA
ATTTGCCGCCCGTCATCCCA

Product: putative cytoplasmic protein

Products: NA

Alternate protein names: GPW/Gp25 Family Protein; Cytoplasmic Protein; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; T6SS Lysozyme-Related D; Type VI Secretion System Protein ImpF; Cytoplasmic Protein SciD; Type VI Secretion System Lysozyme-Related Family Protein; Type VI Secretion System Lysozyme-Related Family; Type VI Secretion System Lysozyme-Like Protein

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSASRQRPGNHLLPTLFDRLCDDAPNQKRDHGISVSPVQIKEIIRRDLSFLLNTVSHEDDIDAARYPYAAASVLNYGLPP
LAGSFLYEHKWDDIRRAILRTITRFEPRLKASTLQIIPLQDERRQSGHNTLQFEIRGEILTQPYPTAFRVRSALDMEQSR
ITFF

Sequences:

>Translated_164_residues
MSASRQRPGNHLLPTLFDRLCDDAPNQKRDHGISVSPVQIKEIIRRDLSFLLNTVSHEDDIDAARYPYAAASVLNYGLPP
LAGSFLYEHKWDDIRRAILRTITRFEPRLKASTLQIIPLQDERRQSGHNTLQFEIRGEILTQPYPTAFRVRSALDMEQSR
ITFF
>Mature_163_residues
SASRQRPGNHLLPTLFDRLCDDAPNQKRDHGISVSPVQIKEIIRRDLSFLLNTVSHEDDIDAARYPYAAASVLNYGLPPL
AGSFLYEHKWDDIRRAILRTITRFEPRLKASTLQIIPLQDERRQSGHNTLQFEIRGEILTQPYPTAFRVRSALDMEQSRI
TFF

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18933; Mature: 18802

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASRQRPGNHLLPTLFDRLCDDAPNQKRDHGISVSPVQIKEIIRRDLSFLLNTVSHEDD
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
IDAARYPYAAASVLNYGLPPLAGSFLYEHKWDDIRRAILRTITRFEPRLKASTLQIIPLQ
CCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
DERRQSGHNTLQFEIRGEILTQPYPTAFRVRSALDMEQSRITFF
HHHHHCCCCEEEEEECCCEECCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SASRQRPGNHLLPTLFDRLCDDAPNQKRDHGISVSPVQIKEIIRRDLSFLLNTVSHEDD
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
IDAARYPYAAASVLNYGLPPLAGSFLYEHKWDDIRRAILRTITRFEPRLKASTLQIIPLQ
CCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
DERRQSGHNTLQFEIRGEILTQPYPTAFRVRSALDMEQSRITFF
HHHHHCCCCEEEEEECCCEECCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA