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The map label for this gene is safA

Identifier: 30061768

GI number: 30061768

Start: 229169

End: 230215

Strand: Reverse

Name: safA

Synonym: S0211

Alternate gene names: NA

Gene position: 230215-229169 (Counterclockwise)

Preceding gene: 30061769

Following gene: 30061766

Centisome position: 5.01

GC content: 59.69

Gene sequence:

>1047_bases
ATGGAAATATTCCTGTCTGACCCAATTTCGGCGGAATGCCCCTGCGGCCCGGATCTGGAGTACGATCCGGAATACCTGCT
GCTGTTCACCCGCGCCGCACCGCGTGAAGAAGCGCAATATGGCGATTTTGTCAGTACGCCGGAAAACATTAACTGGGCGG
AGCTTGAGCGGGACGCCCATCGTCTGCTGATGCGCAGCAAAGATATCCGCATTCTGGTTGTCCTGCTGCGCTGCCGTATC
CAGCAGGCCGGTGCCAGGGGACTGTCGGAGGCGCTCACGCTGCTGGAAACGTTGTGCTCCACGTACCCGGACGCCATCCA
TCCTCAACTGCTCGCGACTGAAGATATCACCGCCGAAGATGCTGCGGTGGCACGCAGTAACGCGCTGGCGGCGTTGCTGG
ACCACGAAGGTGTAATGGCGGATATTCGTGGCATTACACTGTCAAATAATGCTGCCATGCGCCTTCAGGTGCGGGATGTG
GAGCGTTCGCTATCTGCATTACGCCCGGCGGATGCGCTGGCACCAGAATCGGTACGCCAGCAACTGGCAGACCTGGAAGC
GCGCGGCACACTGCCGCTGGATGCCTTTCGCCAGGCAGCAGAGACCACTGAGCGGCTGCAACGCCATGCGCGTGAAACGC
TGAATGACCAGGCACCGGACTTCTCCCGTCTGACGCAACTGCTGGCCCTGTTACCGGGAGCAGTGCAGAGCACCACGCCG
GAGATCCTGCCACAACCACAGGCTGAGCAGCCGGAAAACGCCACCATCGTTCATACTGAACAGATGCAGGCAGAGCAGAT
TGCGCTACCGGTGCATATCGCGGAGGAAATATCACCGATGACCGGCGCAGAACCCCGGCAGATCCGCGACCGAAACGACG
CGCTGGAACGCCTGCGTGTCATCCGTCGCTGGTTTGAGCACAGCGAACCGAGCAGCCCGACCATTCCTTTGCTGCGCCAG
GCAGAACGCCTGGTCGGAAAACGCGTCTCGGAGGTAATAAATGAAATTCCAGTAGAACTGCTGGAGAAATGGGATGCGCT
GGAGTAA

Upstream 100 bases:

>100_bases
TTGCCAGATCACGCTCGTCTGGCGGCATCGGCCCATCTGGTGCGTGAGTCCCGCAATCCGGACGGTCTGGCCACCACGCT
GGCGCACTGAGGATAATTAA

Downstream 100 bases:

>100_bases
CAGAAGTGGCCAGAATTTATAATGTCTGGCCATTTTTTAAATCATATCCGTTTTACTTCGGAGTGAAAAATTCTCACTTC
ACCAAAACGACGAAAGCCCG

Product: putative cytoplasmic protein

Products: NA

Alternate protein names: Type VI Secretion-Associated Protein ImpA Family; Cytoplasmic Protein; ImpA Family Type VI Secretion-Associated Protein; ImpA Domain Protein; ImpA-Like; ImpA-Related N-Terminal Family Protein; Type VI Secretion-Associated Protein; T6ss A; Replication/Virulence Associated Protein; Conserved Protein; Type VI Secretion System Protein ImpA; ImpA-Like Protein; ImpA-Related N-Terminal Domain-Containing

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MEIFLSDPISAECPCGPDLEYDPEYLLLFTRAAPREEAQYGDFVSTPENINWAELERDAHRLLMRSKDIRILVVLLRCRI
QQAGARGLSEALTLLETLCSTYPDAIHPQLLATEDITAEDAAVARSNALAALLDHEGVMADIRGITLSNNAAMRLQVRDV
ERSLSALRPADALAPESVRQQLADLEARGTLPLDAFRQAAETTERLQRHARETLNDQAPDFSRLTQLLALLPGAVQSTTP
EILPQPQAEQPENATIVHTEQMQAEQIALPVHIAEEISPMTGAEPRQIRDRNDALERLRVIRRWFEHSEPSSPTIPLLRQ
AERLVGKRVSEVINEIPVELLEKWDALE

Sequences:

>Translated_348_residues
MEIFLSDPISAECPCGPDLEYDPEYLLLFTRAAPREEAQYGDFVSTPENINWAELERDAHRLLMRSKDIRILVVLLRCRI
QQAGARGLSEALTLLETLCSTYPDAIHPQLLATEDITAEDAAVARSNALAALLDHEGVMADIRGITLSNNAAMRLQVRDV
ERSLSALRPADALAPESVRQQLADLEARGTLPLDAFRQAAETTERLQRHARETLNDQAPDFSRLTQLLALLPGAVQSTTP
EILPQPQAEQPENATIVHTEQMQAEQIALPVHIAEEISPMTGAEPRQIRDRNDALERLRVIRRWFEHSEPSSPTIPLLRQ
AERLVGKRVSEVINEIPVELLEKWDALE
>Mature_348_residues
MEIFLSDPISAECPCGPDLEYDPEYLLLFTRAAPREEAQYGDFVSTPENINWAELERDAHRLLMRSKDIRILVVLLRCRI
QQAGARGLSEALTLLETLCSTYPDAIHPQLLATEDITAEDAAVARSNALAALLDHEGVMADIRGITLSNNAAMRLQVRDV
ERSLSALRPADALAPESVRQQLADLEARGTLPLDAFRQAAETTERLQRHARETLNDQAPDFSRLTQLLALLPGAVQSTTP
EILPQPQAEQPENATIVHTEQMQAEQIALPVHIAEEISPMTGAEPRQIRDRNDALERLRVIRRWFEHSEPSSPTIPLLRQ
AERLVGKRVSEVINEIPVELLEKWDALE

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38938; Mature: 38938

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIFLSDPISAECPCGPDLEYDPEYLLLFTRAAPREEAQYGDFVSTPENINWAELERDAH
CEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHH
RLLMRSKDIRILVVLLRCRIQQAGARGLSEALTLLETLCSTYPDAIHPQLLATEDITAED
HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCHHH
AAVARSNALAALLDHEGVMADIRGITLSNNAAMRLQVRDVERSLSALRPADALAPESVRQ
HHHHHHHHHHHHHHCCCCEEHHCCEEECCCCEEEEEHHHHHHHHHHHCCHHCCCHHHHHH
QLADLEARGTLPLDAFRQAAETTERLQRHARETLNDQAPDFSRLTQLLALLPGAVQSTTP
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHCCCH
EILPQPQAEQPENATIVHTEQMQAEQIALPVHIAEEISPMTGAEPRQIRDRNDALERLRV
HHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
IRRWFEHSEPSSPTIPLLRQAERLVGKRVSEVINEIPVELLEKWDALE
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEIFLSDPISAECPCGPDLEYDPEYLLLFTRAAPREEAQYGDFVSTPENINWAELERDAH
CEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHH
RLLMRSKDIRILVVLLRCRIQQAGARGLSEALTLLETLCSTYPDAIHPQLLATEDITAED
HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCHHH
AAVARSNALAALLDHEGVMADIRGITLSNNAAMRLQVRDVERSLSALRPADALAPESVRQ
HHHHHHHHHHHHHHCCCCEEHHCCEEECCCCEEEEEHHHHHHHHHHHCCHHCCCHHHHHH
QLADLEARGTLPLDAFRQAAETTERLQRHARETLNDQAPDFSRLTQLLALLPGAVQSTTP
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHCCCH
EILPQPQAEQPENATIVHTEQMQAEQIALPVHIAEEISPMTGAEPRQIRDRNDALERLRV
HHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
IRRWFEHSEPSSPTIPLLRQAERLVGKRVSEVINEIPVELLEKWDALE
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA