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The map label for this gene is yshA

Identifier: 30024056

GI number: 30024056

Start: 1875436

End: 1876962

Strand: Reverse

Name: yshA

Synonym: L58790

Alternate gene names: 30024056

Gene position: 1876962-1875436 (Counterclockwise)

Preceding gene: 15673792

Following gene: 15673789

Centisome position: 79.34

GC content: 37.46

Gene sequence:

>1527_bases
ATGTCACAAAACACAAAAGGTAAACTCTCACTCGTAGGACTCTCGTTGATGATATTTACGACAGTCTTTGGTTTTGGGAA
TATCCCTGTCGCTTTCTACCAAATGGGTTACGGCGCCATTCCTTGGTATATTATTGGAGCCCTGCTCTTTTTCCTCCCTT
TTGCCTTTATGGTAACGGAAATGGGTTCAGCATTTAAAGATGAAAAAGGAGGAATTTATTCATGGATGAGTGAGGCAGTT
AACCCTACCTTCGCCTTCGTTGGAACATTCATGTGGTATGCTTCTTATGTTATCTGGATGGTAAGTGTTGCCAATAAAAT
TTTGATTCCAATGGTCAATTTGATTTTTGGTAACTCAACACACACCCCTTCATTACTTTGGATTTCAATTGCAGCTGTAG
TTTGGATGGCATTGATTACCTTTATGGTCTCAAAAGGTGTGGAAACCATTAAAAAATTCACCTCTATTGCGGGGGTTGCC
GTTCTTTCACTCAATGTTATATTAATTCTTGGTGCTGTTCTTGTACTTGTTGTTAATGGTCATCCAGCAACACCAATTAA
CCTTGCTGCTTTTACTTCATCTCCTAATCCAACTTTTGATGGTAGTATTGTTGCCTTTATTGCCTTTCTTGTTTTTGCCA
TTTTTGCTTATGGTGGGGTTGAATCAATTGCTGGTTTAGTTGACCAAACTCATGAGCCTGAGAAAAACTTCCCACGAGGA
ATCATCACGTCAGCACTTATTATTGCTGTTGGTTATGCTGTTGCCATTCTTAGTGTTGGTTTCTTTGTTGATTATTCACA
ATGGATTCCAGCCATTAAAGATGGATCAATGAACCTTGGGACTGTTCCTTACATGCTTTTGCAAAACCTTGGTGAAGCGG
TTGGTCATGCACTTGGACTTTCTACTTCCGGAGCAGATATGCTTGGTGGTATTTTCGCCCGCTATATTGGTCTTTCTATG
CTTCTTGCTTACATGGGTGCCTTCTTTACCTTGACTTATAGTCCAATCAAACAGTTGATTACTGGTACACCAGAAAAACT
TTGGCCTGGTAAATTAGGAAAACTTGATGAAGAAGGAATGCCAAAATTTGCAATGTGGATTCAATTTGCAATTGTTACCT
TAATTATTTTTTTGAATTTCTTGACTTCACAAGGTGGAGCAAGTCAATTCTTCCTCATTTTGACTTATATGGCTAATGTT
TCTATGACTTTGCCTTATCTCTTCATCGTTATTGCTTTCTGGTACTTCAAGAAGAATAAAAATATTGTTAAACCAATTGA
ATTCTTTAAATCAAATTTTGTTGTGAACTTCTTGACAATTTTAGTCTTGGTTGTTGTTGGTGGGGCTAACTTCTTCACAA
TTATTCAACCAATTGTGAATTATGTTCAATTACCAGCTGTTGACCAAACTGGTAAAGCATTATCTGAAATGTTGACATCA
TTTATTTCAATGATTGGTGGGCCACTTATCTTTGGTGTAATTGCCTACTTCATGATGCGCAACTATAGAAAGAAAAATAA
CTTGTAA

Upstream 100 bases:

>100_bases
ATATTTTACTGACAACTTTGTTAGTAAAATTGAGCTATTATTCAAGACTTTAAAAATAAAATTGACTGATTATAAGTCAA
TTAATGTAAAAGGAAAGATT

Downstream 100 bases:

>100_bases
TAAAATTATTTTAAAAAAATAAAAGCTGAGTTTGCTCAGCTTTTTTTATATTCAGATATTTTGTCGATAAAAAGCCTTCC
ATATTTTTTGAGTTTAACAG

Product: putative amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MSQNTKGKLSLVGLSLMIFTTVFGFGNIPVAFYQMGYGAIPWYIIGALLFFLPFAFMVTEMGSAFKDEKGGIYSWMSEAV
NPTFAFVGTFMWYASYVIWMVSVANKILIPMVNLIFGNSTHTPSLLWISIAAVVWMALITFMVSKGVETIKKFTSIAGVA
VLSLNVILILGAVLVLVVNGHPATPINLAAFTSSPNPTFDGSIVAFIAFLVFAIFAYGGVESIAGLVDQTHEPEKNFPRG
IITSALIIAVGYAVAILSVGFFVDYSQWIPAIKDGSMNLGTVPYMLLQNLGEAVGHALGLSTSGADMLGGIFARYIGLSM
LLAYMGAFFTLTYSPIKQLITGTPEKLWPGKLGKLDEEGMPKFAMWIQFAIVTLIIFLNFLTSQGGASQFFLILTYMANV
SMTLPYLFIVIAFWYFKKNKNIVKPIEFFKSNFVVNFLTILVLVVVGGANFFTIIQPIVNYVQLPAVDQTGKALSEMLTS
FISMIGGPLIFGVIAYFMMRNYRKKNNL

Sequences:

>Translated_508_residues
MSQNTKGKLSLVGLSLMIFTTVFGFGNIPVAFYQMGYGAIPWYIIGALLFFLPFAFMVTEMGSAFKDEKGGIYSWMSEAV
NPTFAFVGTFMWYASYVIWMVSVANKILIPMVNLIFGNSTHTPSLLWISIAAVVWMALITFMVSKGVETIKKFTSIAGVA
VLSLNVILILGAVLVLVVNGHPATPINLAAFTSSPNPTFDGSIVAFIAFLVFAIFAYGGVESIAGLVDQTHEPEKNFPRG
IITSALIIAVGYAVAILSVGFFVDYSQWIPAIKDGSMNLGTVPYMLLQNLGEAVGHALGLSTSGADMLGGIFARYIGLSM
LLAYMGAFFTLTYSPIKQLITGTPEKLWPGKLGKLDEEGMPKFAMWIQFAIVTLIIFLNFLTSQGGASQFFLILTYMANV
SMTLPYLFIVIAFWYFKKNKNIVKPIEFFKSNFVVNFLTILVLVVVGGANFFTIIQPIVNYVQLPAVDQTGKALSEMLTS
FISMIGGPLIFGVIAYFMMRNYRKKNNL
>Mature_507_residues
SQNTKGKLSLVGLSLMIFTTVFGFGNIPVAFYQMGYGAIPWYIIGALLFFLPFAFMVTEMGSAFKDEKGGIYSWMSEAVN
PTFAFVGTFMWYASYVIWMVSVANKILIPMVNLIFGNSTHTPSLLWISIAAVVWMALITFMVSKGVETIKKFTSIAGVAV
LSLNVILILGAVLVLVVNGHPATPINLAAFTSSPNPTFDGSIVAFIAFLVFAIFAYGGVESIAGLVDQTHEPEKNFPRGI
ITSALIIAVGYAVAILSVGFFVDYSQWIPAIKDGSMNLGTVPYMLLQNLGEAVGHALGLSTSGADMLGGIFARYIGLSML
LAYMGAFFTLTYSPIKQLITGTPEKLWPGKLGKLDEEGMPKFAMWIQFAIVTLIIFLNFLTSQGGASQFFLILTYMANVS
MTLPYLFIVIAFWYFKKNKNIVKPIEFFKSNFVVNFLTILVLVVVGGANFFTIIQPIVNYVQLPAVDQTGKALSEMLTSF
ISMIGGPLIFGVIAYFMMRNYRKKNNL

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87082380, Length=513, Percent_Identity=46.7836257309941, Blast_Score=431, Evalue=1e-122,
Organism=Escherichia coli, GI87081798, Length=438, Percent_Identity=26.9406392694064, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI48994921, Length=414, Percent_Identity=25.6038647342995, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1787768, Length=430, Percent_Identity=23.2558139534884, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 55630; Mature: 55499

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQNTKGKLSLVGLSLMIFTTVFGFGNIPVAFYQMGYGAIPWYIIGALLFFLPFAFMVTE
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
MGSAFKDEKGGIYSWMSEAVNPTFAFVGTFMWYASYVIWMVSVANKILIPMVNLIFGNST
HHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HTPSLLWISIAAVVWMALITFMVSKGVETIKKFTSIAGVAVLSLNVILILGAVLVLVVNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPATPINLAAFTSSPNPTFDGSIVAFIAFLVFAIFAYGGVESIAGLVDQTHEPEKNFPRG
CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHH
IITSALIIAVGYAVAILSVGFFVDYSQWIPAIKDGSMNLGTVPYMLLQNLGEAVGHALGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
STSGADMLGGIFARYIGLSMLLAYMGAFFTLTYSPIKQLITGTPEKLWPGKLGKLDEEGM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PKFAMWIQFAIVTLIIFLNFLTSQGGASQFFLILTYMANVSMTLPYLFIVIAFWYFKKNK
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NIVKPIEFFKSNFVVNFLTILVLVVVGGANFFTIIQPIVNYVQLPAVDQTGKALSEMLTS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FISMIGGPLIFGVIAYFMMRNYRKKNNL
HHHHHCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]